RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 TMEM132CQ8N3T6 1108 aa15.91■□□□□ 0.14
SQLE-205ENST00000521232 L3MBTL4Q8NA19 623 aa15.91■□□□□ 0.14
SQLE-205ENST00000521232 TMEM178AQ8NBL3 297 aa15.91■□□□□ 0.14
SQLE-205ENST00000521232 C7orf57Q8NEG2 295 aa15.91■□□□□ 0.14
SQLE-205ENST00000521232 RGMAQ96B86 450 aa15.91■□□□□ 0.14
SQLE-205ENST00000521232 VMP1Q96GC9 406 aa15.91■□□□□ 0.14
SQLE-205ENST00000521232 HES7Q9BYE0 225 aa15.91■□□□□ 0.14
SQLE-205ENST00000521232 ALOXE3Q9BYJ1 711 aa15.91■□□□□ 0.14
SQLE-205ENST00000521232 OR51B5Q9H339 312 aa15.91■□□□□ 0.14
SQLE-205ENST00000521232 IPPKQ9H8X2 491 aa15.91■□□□□ 0.14
SQLE-205ENST00000521232 ACTR8Q9H981 624 aa15.91■□□□□ 0.14
SQLE-205ENST00000521232 KLHL1Q9NR64 748 aa15.91■□□□□ 0.14
SQLE-205ENST00000521232 PSD3Q9NYI0 1048 aa15.91■□□□□ 0.14
SQLE-205ENST00000521232 CPSF2Q9P2I0 782 aaKnown RBP15.91■□□□□ 0.14
SQLE-205ENST00000521232 ZNF223Q9UK11 482 aaPredicted RBP15.91■□□□□ 0.14
SQLE-205ENST00000521232 TMCO1Q9UM00 188 aa15.91■□□□□ 0.14
SQLE-205ENST00000521232 TRBV11-1A0A0K0K1C0 115 aa15.9■□□□□ 0.14
SQLE-205ENST00000521232 A0A1B0GUH1 482 aa15.9■□□□□ 0.14
SQLE-205ENST00000521232 SAP18O00422 153 aaKnown RBP15.9■□□□□ 0.14
SQLE-205ENST00000521232 FCHO1O14526 889 aa15.9■□□□□ 0.14
SQLE-205ENST00000521232 SH3BGRLO75368 114 aa15.9■□□□□ 0.14
SQLE-205ENST00000521232 PTX3P26022 381 aaPredicted RBP15.9■□□□□ 0.14
SQLE-205ENST00000521232 HLCSP50747 726 aa15.9■□□□□ 0.14
SQLE-205ENST00000521232 KCNK10P57789 538 aa15.9■□□□□ 0.14
SQLE-205ENST00000521232 PMP22Q01453 160 aa15.9■□□□□ 0.14
SQLE-205ENST00000521232 SRSF11Q05519 484 aaKnown RBP15.9■□□□□ 0.14
SQLE-205ENST00000521232 TSNAXIP1Q2TAA8 658 aa15.9■□□□□ 0.14
SQLE-205ENST00000521232 GFRALQ6UXV0 394 aa15.9■□□□□ 0.14
SQLE-205ENST00000521232 GALNTL5Q7Z4T8 443 aa15.9■□□□□ 0.14
SQLE-205ENST00000521232 CLNKQ7Z7G1 428 aa15.9■□□□□ 0.14
SQLE-205ENST00000521232 IFT20Q8IY31 132 aa15.9■□□□□ 0.14
SQLE-205ENST00000521232 RNF175Q8N4F7 328 aa15.9■□□□□ 0.14
SQLE-205ENST00000521232 UHMK1Q8TAS1 419 aaKnown RBP15.9■□□□□ 0.14
SQLE-205ENST00000521232 PTPMT1Q8WUK0 201 aaPredicted RBP15.9■□□□□ 0.14
SQLE-205ENST00000521232 NCLNQ969V3 563 aa15.9■□□□□ 0.14
SQLE-205ENST00000521232 RELTQ969Z4 430 aa15.9■□□□□ 0.14
SQLE-205ENST00000521232 REPS1Q96D71 796 aa15.9■□□□□ 0.14
SQLE-205ENST00000521232 PRM3Q9NNZ6 103 aa15.9■□□□□ 0.14
SQLE-205ENST00000521232 DMRT3Q9NQL9 472 aa15.9■□□□□ 0.14
SQLE-205ENST00000521232 SEC14L3Q9UDX4 400 aa15.9■□□□□ 0.14
SQLE-205ENST00000521232 NFU1Q9UMS0 254 aa15.9■□□□□ 0.14
SQLE-205ENST00000521232 SPACA6W5XKT8 324 aa15.9■□□□□ 0.14
SQLE-205ENST00000521232 CELSR2Q9HCU4 2923 aa15.9■□□□□ 0.14
SQLE-205ENST00000521232 TRIM49D1C9J1S8 452 aa15.89■□□□□ 0.13
SQLE-205ENST00000521232 STX16-NPEPL1H3BU86 382 aa15.89■□□□□ 0.13
SQLE-205ENST00000521232 STX16O14662 325 aa15.89■□□□□ 0.13
SQLE-205ENST00000521232 SLC25A12O75746 678 aa15.89■□□□□ 0.13
SQLE-205ENST00000521232 WISP2O76076 250 aa15.89■□□□□ 0.13
SQLE-205ENST00000521232 ZFAND5O76080 213 aa15.89■□□□□ 0.13
SQLE-205ENST00000521232 UNC5CO95185 931 aa15.89■□□□□ 0.13
SQLE-205ENST00000521232 SSR2P43308 183 aa15.89■□□□□ 0.13
SQLE-205ENST00000521232 STX4Q12846 297 aa15.89■□□□□ 0.13
SQLE-205ENST00000521232 SLAMF1Q13291 335 aa15.89■□□□□ 0.13
SQLE-205ENST00000521232 DDX39BQ13838 428 aaKnown RBP15.89■□□□□ 0.13
SQLE-205ENST00000521232 SERTAD2Q14140 314 aa15.89■□□□□ 0.13
SQLE-205ENST00000521232 CPSF6Q16630 551 aaKnown RBP eCLIP15.89■□□□□ 0.13
SQLE-205ENST00000521232 MYLK4Q86YV6 388 aaPredicted RBP15.89■□□□□ 0.13
SQLE-205ENST00000521232 PTGR2Q8N8N7 351 aaPredicted RBP15.89■□□□□ 0.13
SQLE-205ENST00000521232 MORN4Q8NDC4 146 aa15.89■□□□□ 0.13
SQLE-205ENST00000521232 WDR20Q8TBZ3 569 aa15.89■□□□□ 0.13
SQLE-205ENST00000521232 DAZLQ92904 295 aaKnown RBP15.89■□□□□ 0.13
SQLE-205ENST00000521232 ANKRD9Q96BM1 317 aaPredicted RBP15.89■□□□□ 0.13
SQLE-205ENST00000521232 MTERF1Q99551 399 aaKnown RBP15.89■□□□□ 0.13
SQLE-205ENST00000521232 MS4A12Q9NXJ0 267 aa15.89■□□□□ 0.13
SQLE-205ENST00000521232 FBXW2Q9UKT8 454 aa15.89■□□□□ 0.13
SQLE-205ENST00000521232 RNF11Q9Y3C5 154 aa15.89■□□□□ 0.13
SQLE-205ENST00000521232 CLCA3PQ9Y6N3 262 aa15.89■□□□□ 0.13
SQLE-205ENST00000521232 GTF3C1Q12789 2109 aa15.89■□□□□ 0.13
SQLE-205ENST00000521232 A1L4Q6 167 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 TMEM200CA6NKL6 621 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 FOXE1O00358 373 aaPredicted RBP15.88■□□□□ 0.13
SQLE-205ENST00000521232 PLPP1O14494 284 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 OR7A17O14581 309 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 NME2P1O60361 137 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 LDB3O75112 727 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 CLDN9O95484 217 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 CLDN1O95832 211 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 IFNA16P05015 189 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 ABHD2P08910 425 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 SNRPAP09012 282 aaKnown RBP15.88■□□□□ 0.13
SQLE-205ENST00000521232 NME2P22392 152 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 CPN2P22792 545 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 PER3P56645 1201 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 RPS13P62277 151 aaKnown RBP15.88■□□□□ 0.13
SQLE-205ENST00000521232 PHEXP78562 749 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 BIKQ13323 160 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 CUL3Q13618 768 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 MAPKAPK3Q16644 382 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 KRTCAP3Q53RY4 240 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 LGSNQ5TDP6 509 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 HIST2H2BCQ6DN03 193 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 TRMT10CQ7L0Y3 403 aaKnown RBP15.88■□□□□ 0.13
SQLE-205ENST00000521232 MAMDC2Q7Z304 686 aaPredicted RBP15.88■□□□□ 0.13
SQLE-205ENST00000521232 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.88■□□□□ 0.13
SQLE-205ENST00000521232 ZCCHC7Q8N3Z6 543 aaKnown RBP15.88■□□□□ 0.13
SQLE-205ENST00000521232 TMEM151AQ8N4L1 468 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 FAM98AQ8NCA5 519 aaKnown RBP15.88■□□□□ 0.13
SQLE-205ENST00000521232 OR14A16Q8NHC5 309 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 THAP3Q8WTV1 239 aaPredicted RBP15.88■□□□□ 0.13
SQLE-205ENST00000521232 PHF21BQ96EK2 531 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms