RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 EFHD1Q9BUP0 239 aa14.46□□□□□ -0.09
LSM1-203ENST00000520755 GPR87Q9BY21 358 aa14.46□□□□□ -0.09
LSM1-203ENST00000520755 ACTL8Q9H568 366 aa14.46□□□□□ -0.09
LSM1-203ENST00000520755 COPS7BQ9H9Q2 264 aaPredicted RBP14.46□□□□□ -0.09
LSM1-203ENST00000520755 TEX10Q9NXF1 929 aaPredicted RBP14.46□□□□□ -0.09
LSM1-203ENST00000520755 AHSPQ9NZD4 102 aa14.46□□□□□ -0.09
LSM1-203ENST00000520755 FARSAQ9Y285 508 aaKnown RBP14.46□□□□□ -0.09
LSM1-203ENST00000520755 PADI2Q9Y2J8 665 aa14.46□□□□□ -0.09
LSM1-203ENST00000520755 TMED5Q9Y3A6 229 aa14.46□□□□□ -0.09
LSM1-203ENST00000520755 ZFHX4Q86UP3 3567 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 A0A087WV48 116 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 A0A088AWK7 358 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 ANKRD28O15084 1053 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 CNOT3O75175 753 aaKnown RBP14.45□□□□□ -0.1
LSM1-203ENST00000520755 G6PDP11413 515 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 ZNF10P21506 573 aaPredicted RBP14.45□□□□□ -0.1
LSM1-203ENST00000520755 PTPN4P29074 926 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 OCA2Q04671 838 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 ZNF763Q0D2J5 394 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 PTGR1Q14914 329 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 ST3GAL2Q16842 350 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 NIPAL1Q6NVV3 410 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 MRPL14Q6P1L8 145 aaKnown RBP14.45□□□□□ -0.1
LSM1-203ENST00000520755 CCDC81Q6ZN84 652 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 SHISA6Q6ZSJ9 500 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 PAGE2Q7Z2X7 111 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 SPATA19Q7Z5L4 167 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 PRSS58Q8IYP2 241 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 MMP21Q8N119 569 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 CA13Q8N1Q1 262 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 LIX1Q8N485 282 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 CLHC1Q8NHS4 586 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 STARD8Q92502 1023 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 EGLN2Q96KS0 407 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 TSSK3Q96PN8 268 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 CSF3RQ99062 836 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 MAPKAP1Q9BPZ7 522 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 BRINP2Q9C0B6 783 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 SOX17Q9H6I2 414 aaPredicted RBP14.45□□□□□ -0.1
LSM1-203ENST00000520755 NOP53Q9NZM5 478 aaKnown RBP14.45□□□□□ -0.1
LSM1-203ENST00000520755 KCMF1Q9P0J7 381 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 ZNF282Q9UDV7 671 aaPredicted RBP14.45□□□□□ -0.1
LSM1-203ENST00000520755 G3BP2Q9UN86 482 aaKnown RBP14.45□□□□□ -0.1
LSM1-203ENST00000520755 EXO1Q9UQ84 846 aaKnown RBP14.45□□□□□ -0.1
LSM1-203ENST00000520755 PTRH2Q9Y3E5 179 aaKnown RBP14.45□□□□□ -0.1
LSM1-203ENST00000520755 MAP4K5Q9Y4K4 846 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 ASB4Q9Y574 426 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 GPR45Q9Y5Y3 372 aa14.45□□□□□ -0.1
LSM1-203ENST00000520755 EFSO43281 561 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 B3GALT2O43825 422 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 PRKRAO75569 313 aaKnown RBP14.44□□□□□ -0.1
LSM1-203ENST00000520755 ALBP02768 609 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 CD63P08962 238 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 ANXA4P09525 319 aaPredicted RBP14.44□□□□□ -0.1
LSM1-203ENST00000520755 FOLR3P41439 243 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 XCR1P46094 333 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 MAPK12P53778 367 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 LIM2P55344 173 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 MAD2L1Q13257 205 aaPredicted RBP14.44□□□□□ -0.1
LSM1-203ENST00000520755 SLAMF1Q13291 335 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 NKG7Q16617 165 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 VWA2Q5GFL6 755 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 CCNYL2Q5T2Q4 361 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 CYP20A1Q6UW02 462 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 TMEM151BQ8IW70 566 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 OR51Q1Q8NH59 317 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 STT3BQ8TCJ2 826 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 BCAS4Q8TDM0 211 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 C16orf78Q8WTQ4 265 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 NUDT8Q8WV74 236 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 MIEF2Q96C03 454 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 TM4SF18Q96CE8 201 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 PEX11GQ96HA9 241 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 RILPQ96NA2 401 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 RBCK1Q9BYM8 510 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 ROGDIQ9GZN7 287 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 CPNE5Q9HCH3 593 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 MYNNQ9NPC7 610 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 MKKSQ9NPJ1 570 aaPredicted RBP14.44□□□□□ -0.1
LSM1-203ENST00000520755 BAIAP2L1Q9UHR4 511 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 TCFL5Q9UL49 500 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 DAPP1Q9UN19 280 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 ATG4BQ9Y4P1 393 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 PCDHGA6Q9Y5G7 932 aa14.44□□□□□ -0.1
LSM1-203ENST00000520755 COPG1Q9Y678 874 aaKnown RBP14.44□□□□□ -0.1
LSM1-203ENST00000520755 GNG14A0A1W2PPG7 69 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 A0A1W2PR48 441 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 NDUFAB1O14561 156 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 UBDO15205 165 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 CHST10O43529 356 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 CREG1O75629 220 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 KLF7O75840 302 aaPredicted RBP14.43□□□□□ -0.1
LSM1-203ENST00000520755 AIFM1O95831 613 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 IL3P08700 152 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 ZGLP1P0C6A0 271 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 FAM58BPP0C7Q3 252 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 CD1EP15812 388 aa14.43□□□□□ -0.1
LSM1-203ENST00000520755 ZFP36L2P47974 494 aaKnown RBP14.43□□□□□ -0.1
LSM1-203ENST00000520755 MRPL19P49406 292 aaKnown RBP14.43□□□□□ -0.1
LSM1-203ENST00000520755 HNRNPFP52597 415 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms