RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 ATP8B4Q8TF62 1192 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 KCNE4Q8WWG9 221 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 PPP1R14BQ96C90 147 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 TLCD1Q96CP7 247 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 SIPA1Q96FS4 1042 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 MAGED4Q96JG8 741 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 PRAC1Q96KF2 57 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 ATP6V1G3Q96LB4 118 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 C4orf45Q96LM5 186 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 C10orf90Q96M02 699 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 CCDC114Q96M63 670 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 ZIM3Q96PE6 472 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 GSDMAQ96QA5 445 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 NKX3-1Q99801 234 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 TIPINQ9BVW5 301 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 NACAP1Q9BZK3 213 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 TRIM7Q9C029 511 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 YIPF3Q9GZM5 350 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 IQCGQ9H095 443 aaKnown RBP2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 ACTL8Q9H568 366 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 TMBIM4Q9HC24 238 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 DMAP1Q9NPF5 467 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 SH3GLB2Q9NR46 395 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 ZDHHC18Q9NUE0 388 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 RNF186Q9NXI6 227 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 AATFQ9NY61 560 aaKnown RBP eCLIP2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 ATXN10Q9UBB4 475 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 TUBGCP4Q9UGJ1 667 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 CIDEBQ9UHD4 219 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 TRMT112Q9UI30 125 aaKnown RBP2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 MRPS28Q9Y2Q9 187 aaKnown RBP2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 LAMB4A4D0S4 1761 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 AFF2P51816 1311 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 MROH7Q68CQ1 1323 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 MYH11P35749 1972 aa2.89□□□□□ -1.95
HMGB1P41-201ENST00000520234 NUP188Q5SRE5 1749 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 WDR81Q562E7 1941 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 DISP2A7MBM2 1401 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 RIC1Q4ADV7 1423 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 ARFGEF2Q9Y6D5 1785 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 GOLGA6L7A0A1B0GV03 622 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 C2CD4DB7Z1M9 353 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 H0YAE9 185 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 EXTL3O43909 919 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 ECE2O60344 883 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 LCA5LO95447 670 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 GSRP00390 522 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 RPSAP08865 295 aaKnown RBP2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 CCDC166P0CW27 439 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 SCG2P13521 617 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 CCNB1P14635 433 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 DARSP14868 501 aaKnown RBP2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 ATP6V1C1P21283 382 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 AZGP1P25311 298 aaKnown RBP2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 MARCKSP29966 332 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 ALDH3A1P30838 453 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 CASP14P31944 242 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 PEX19P40855 299 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 NPY4RP50391 375 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 HAND2P61296 217 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 GCNT1Q02742 428 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 BNIP1Q12981 228 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 TMED1Q13445 227 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 HNRNPDQ14103 355 aaKnown RBP2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 ITIH4Q14624 930 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 UAP1Q16222 522 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 CTU2Q2VPK5 515 aaKnown RBP2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 CCDC152Q4G0S7 254 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 AGBL2Q5U5Z8 902 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 SUSD4Q5VX71 490 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 GALNT17Q6IS24 598 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 PWWP2BQ6NUJ5 590 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 SLC25A47Q6Q0C1 308 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 FIP1L1Q6UN15 594 aaKnown RBP2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 TMEM207Q6UWW9 146 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 TIGD4Q8IY51 512 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 THNSL1Q8IYQ7 743 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 C4orf32Q8N8J7 132 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 GPRC5AQ8NFJ5 357 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 OR10Q1Q8NGQ4 319 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 OR1L3Q8NH93 324 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 MAIP1Q8WWC4 291 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 ZNRF4Q8WWF5 429 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 LZICQ8WZA0 190 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 RAPGEF5Q92565 580 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 ESR2Q92731 530 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 KIFAP3Q92845 792 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 PGM2Q96G03 612 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 PAGE5Q96GU1 130 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 ART5Q96L15 291 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 SPATA33Q96N06 139 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 GBP5Q96PP8 586 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 TSC22D3Q99576 134 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 LPAR4Q99677 370 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 FERMT1Q9BQL6 677 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 MGME1Q9BQP7 344 aa2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 RIOK1Q9BRS2 568 aaKnown RBP2.88□□□□□ -1.95
HMGB1P41-201ENST00000520234 CCDC28BQ9BUN5 200 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms