RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 FAM227AF5H4B4 570 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 BMP10O95393 424 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 AIFM1O95831 613 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 RAB40ALP0C0E4 278 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 ATXN8OSP0DMR3 200 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 NR2F6P10588 404 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 DRD2P14416 443 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 MRPL19P49406 292 aaKnown RBP16.78■□□□□ 0.28
SDC2-205ENST00000520233 CLDN8P56748 225 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 OCA2Q04671 838 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 C2orf80Q0P641 193 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 PTGR1Q14914 329 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 PDCD4Q53EL6 469 aaKnown RBP16.78■□□□□ 0.28
SDC2-205ENST00000520233 GKAP1Q5VSY0 366 aaPredicted RBP16.78■□□□□ 0.28
SDC2-205ENST00000520233 MLIPQ5VWP3 458 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 C18orf63Q68DL7 685 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 DTX1Q86Y01 620 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 ZC3H7AQ8IWR0 971 aaKnown RBP16.78■□□□□ 0.28
SDC2-205ENST00000520233 FAM47BQ8NA70 645 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 CLHC1Q8NHS4 586 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 CDC26Q8NHZ8 85 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 MARK4Q96L34 752 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 CATSPER2Q96P56 530 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 CSF3RQ99062 836 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 FAM117AQ9C073 453 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 WDR54Q9H977 334 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 SDR39U1Q9NRG7 319 aaPredicted RBP16.78■□□□□ 0.28
SDC2-205ENST00000520233 CTSFQ9UBX1 484 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 NXT1Q9UKK6 140 aaKnown RBP16.78■□□□□ 0.28
SDC2-205ENST00000520233 MAPRE3Q9UPY8 281 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 MRPS33Q9Y291 106 aaKnown RBP16.78■□□□□ 0.28
SDC2-205ENST00000520233 PCDHA9Q9Y5H5 950 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 SCN3AQ9NY46 2000 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 KNTC1P50748 2209 aa16.78■□□□□ 0.28
SDC2-205ENST00000520233 VSTM2BA6NLU5 285 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 ANKRD28O15084 1053 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 PRMT3O60678 531 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 FHP07954 510 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 LIPCP11150 499 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 NCF2P19878 526 aaPredicted RBP16.77■□□□□ 0.28
SDC2-205ENST00000520233 DDCP20711 480 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 PRPS1L1P21108 318 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 JAK1P23458 1154 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 STAT5AP42229 794 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 ATP4BP51164 291 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 C21orf58P58505 322 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 RPS6KA2Q15349 733 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 NKG7Q16617 165 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 VWA2Q5GFL6 755 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 RIPOR1Q6ZS17 1223 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 ZNF595Q8IYB9 648 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 CACNA2D3Q8IZS8 1091 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 STT3BQ8TCJ2 826 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 CT55Q8WUE5 264 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 NKD1Q969G9 470 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 MIEF2Q96C03 454 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 RBCK1Q9BYM8 510 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 ACTL8Q9H568 366 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 REEP4Q9H6H4 257 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 RPF2Q9H7B2 306 aaKnown RBP16.77■□□□□ 0.28
SDC2-205ENST00000520233 LANCL2Q9NS86 450 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 HEY2Q9UBP5 337 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 ARL2BPQ9Y2Y0 163 aa16.77■□□□□ 0.28
SDC2-205ENST00000520233 COPG1Q9Y678 874 aaKnown RBP16.77■□□□□ 0.28
SDC2-205ENST00000520233 CLDN4O14493 209 aa16.76■□□□□ 0.27
SDC2-205ENST00000520233 CNOT3O75175 753 aaKnown RBP16.76■□□□□ 0.27
SDC2-205ENST00000520233 ZGLP1P0C6A0 271 aa16.76■□□□□ 0.27
SDC2-205ENST00000520233 TCN2P20062 427 aa16.76■□□□□ 0.27
SDC2-205ENST00000520233 RPL3P39023 403 aaKnown RBP16.76■□□□□ 0.27
SDC2-205ENST00000520233 HNRNPFP52597 415 aaKnown RBP16.76■□□□□ 0.27
SDC2-205ENST00000520233 HSD17B7P56937 341 aa16.76■□□□□ 0.27
SDC2-205ENST00000520233 STX1BP61266 288 aa16.76■□□□□ 0.27
SDC2-205ENST00000520233 MC1RQ01726 317 aa16.76■□□□□ 0.27
SDC2-205ENST00000520233 ERV3-1Q14264 604 aa16.76■□□□□ 0.27
SDC2-205ENST00000520233 NCF4Q15080 339 aa16.76■□□□□ 0.27
SDC2-205ENST00000520233 OR52E8Q6IFG1 317 aa16.76■□□□□ 0.27
SDC2-205ENST00000520233 SLC48A1Q6P1K1 146 aa16.76■□□□□ 0.27
SDC2-205ENST00000520233 RIMKLAQ8IXN7 391 aa16.76■□□□□ 0.27
SDC2-205ENST00000520233 MMP21Q8N119 569 aa16.76■□□□□ 0.27
SDC2-205ENST00000520233 MIER2Q8N344 545 aa16.76■□□□□ 0.27
SDC2-205ENST00000520233 TMEM52Q8NDY8 209 aa16.76■□□□□ 0.27
SDC2-205ENST00000520233 BCAS4Q8TDM0 211 aa16.76■□□□□ 0.27
SDC2-205ENST00000520233 TANKQ92844 425 aa16.76■□□□□ 0.27
SDC2-205ENST00000520233 MTERF3Q96E29 417 aa16.76■□□□□ 0.27
SDC2-205ENST00000520233 ZNF764Q96H86 408 aaPredicted RBP16.76■□□□□ 0.27
SDC2-205ENST00000520233 DPY30Q9C005 99 aa16.76■□□□□ 0.27
SDC2-205ENST00000520233 ZNF385DQ9H6B1 395 aa16.76■□□□□ 0.27
SDC2-205ENST00000520233 MRGBPQ9NV56 204 aa16.76■□□□□ 0.27
SDC2-205ENST00000520233 EHD3Q9NZN3 535 aa16.76■□□□□ 0.27
SDC2-205ENST00000520233 ZIM2Q9NZV7 527 aa16.76■□□□□ 0.27
SDC2-205ENST00000520233 EXO1Q9UQ84 846 aaKnown RBP16.76■□□□□ 0.27
SDC2-205ENST00000520233 C21orf140B9A014 251 aa16.75■□□□□ 0.27
SDC2-205ENST00000520233 NDUFAB1O14561 156 aa16.75■□□□□ 0.27
SDC2-205ENST00000520233 TERTO14746 1132 aaKnown RBP16.75■□□□□ 0.27
SDC2-205ENST00000520233 PGRMC2O15173 223 aa16.75■□□□□ 0.27
SDC2-205ENST00000520233 AKAP10O43572 662 aa16.75■□□□□ 0.27
SDC2-205ENST00000520233 TBX19O60806 448 aa16.75■□□□□ 0.27
SDC2-205ENST00000520233 B4GALT2O60909 372 aa16.75■□□□□ 0.27
SDC2-205ENST00000520233 JRKO75564 520 aa16.75■□□□□ 0.27
SDC2-205ENST00000520233 PRKRAO75569 313 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms