RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 CEACAM1P13688 526 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 GLRA1P23415 457 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 GIFP27352 417 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 CCL11P51671 97 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 PAX9P55771 341 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 XGP55808 180 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 KARSQ15046 597 aaKnown RBP4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 C3AR1Q16581 482 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 FAM159AQ6UWV7 190 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 Q6ZVQ6 151 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 DCLK2Q8N568 766 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 OR6S1Q8NH40 331 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 GOLGA5Q8TBA6 731 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 MRPL53Q96EL3 112 aaKnown RBP4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 ZNF274Q96GC6 653 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 ERGIC2Q96RQ1 377 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 CBWD1Q9BRT8 395 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 FUNDC2Q9BWH2 189 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 NMNAT2Q9BZQ4 307 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 HOXD1Q9GZZ0 328 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 SLC26A1Q9H2B4 701 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 ECT2Q9H8V3 914 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 CNOT2Q9NZN8 540 aaKnown RBP4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 VPS54Q9P1Q0 977 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 SH3BGRL2Q9UJC5 107 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 ERRFI1Q9UJM3 462 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 MRTO4Q9UKD2 239 aaKnown RBP4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 DISP3Q9P2K9 1392 aa4.61□□□□□ -1.67
HMGB1P46-201ENST00000520062 A0A1W2PR80 420 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 F8WDY8 70 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 ECE2O60344 883 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 SYNGR4O95473 234 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 PTBP3O95758 552 aaKnown RBP4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 ANGPTL1O95841 491 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 HIST1H2AGP0C0S8 130 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 EDNRAP25101 427 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 AKT2P31751 481 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 KIF5BP33176 963 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 ACAA2P42765 397 aaKnown RBP4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 SCGB2A2Q13296 93 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 PDIA5Q14554 519 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 EXOSC7Q15024 291 aaKnown RBP4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 TRADDQ15628 312 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 GPAT3Q53EU6 434 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 FFAR4Q5NUL3 377 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 TEX35Q5T0J7 233 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 ABRAXAS1Q6UWZ7 409 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 ISLR2Q6UXK2 745 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 HOGA1Q86XE5 327 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 CACUL1Q86Y37 369 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 C9orf106Q8NAJ2 232 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 OR5M9Q8NGP3 310 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 HIST1H2ACQ93077 130 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 SYAP1Q96A49 352 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 WWP1Q9H0M0 922 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 TMEM231Q9H6L2 316 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 HPS4Q9NQG7 708 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 FAM212BQ9NTI7 297 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 MED17Q9NVC6 651 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 TECRQ9NZ01 308 aaKnown RBP4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 AP1M2Q9Y6Q5 423 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 U3KQV3 271 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 FGD5Q6ZNL6 1462 aa4.6□□□□□ -1.67
HMGB1P46-201ENST00000520062 IQCMA0A1B0GVH7 501 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 TMEM89A2RUT3 159 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 YJEFN3A6XGL0 299 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 SMPD2O60906 423 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 LRCH4O75427 683 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 AKR7A3O95154 331 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 PATE4P0C8F1 98 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 RALAP11233 206 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 GNB3P16520 340 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 GPX3P22352 226 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 PKLRP30613 574 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 CHRNB4P30926 498 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 GPR183P32249 361 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 MAP2K2P36507 400 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 TSFMP43897 325 aaKnown RBP4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 SLC6A8P48029 635 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 FHITP49789 147 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 TKTL1P51854 596 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 BACE1P56817 501 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 SLC26A5P58743 744 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 CDKL1Q00532 357 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 PRKCEQ02156 737 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 SPP2Q13103 211 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 SNX1Q13596 522 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 CEBPEQ15744 281 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 RFTN2Q52LD8 501 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 IL23RQ5VWK5 629 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 SLC22A16Q86VW1 577 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 LRRC17Q8N6Y2 441 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 MINDY2Q8NBR6 621 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 GPR148Q8TDV2 347 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 PRAC1Q96KF2 57 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 FAM218AQ96MZ4 157 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 INPP4AQ96PE3 977 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 CTAGE1Q96RT6 745 aa4.59□□□□□ -1.67
HMGB1P46-201ENST00000520062 RWDD1Q9H446 243 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms