RNA–Protein interactions for RNA: ENST00000519599.1

IGKV3D-25-201, Transcript of immunoglobulin kappa variable 3D-25 (pseudogene), humanhuman

BASIC

Gene IGKV3D-25, Length 235 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-25-201ENST00000519599 CTNSO60931 367 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 SH3BGRLO75368 114 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 EEDO75530 441 aaKnown RBP5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 GLSO94925 669 aaPredicted RBP5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 OR6B1O95007 311 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 SIX3O95343 332 aaPredicted RBP5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 TGFB1P01137 390 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 CD46P15529 392 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ENDOUP21128 410 aaKnown RBP5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 HIST1H1TP22492 207 aaPredicted RBP5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 EEF1DP29692 281 aaKnown RBP5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 SPRP35270 261 aaPredicted RBP5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 BSGP35613 385 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 MSH2P43246 934 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 KIR3DL1P43629 444 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 CYB561P49447 251 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 MEOX1P50221 254 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 CLCN2P51788 898 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 HK2P52789 917 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 MTTPP55157 894 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 KRTAP10-9P60411 292 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ALDH6A1Q02252 535 aaKnown RBP5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ID2Q02363 134 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ACTN3Q08043 901 aaPredicted RBP5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 FOXO1Q12778 655 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 CALCOCO2Q13137 446 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 PCBP2Q15366 365 aaKnown RBP eCLIP5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ELAVL1Q15717 326 aaKnown RBP5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ZNF630Q2M218 657 aaPredicted RBP5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 DEPDC1Q5TB30 811 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 C18orf63Q68DL7 685 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 SP5Q6BEB4 398 aaPredicted RBP5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 GRHL2Q6ISB3 625 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 TRIM40Q6P9F5 258 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 BNC2Q6ZN30 1099 aaPredicted RBP5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 FRA10AC1Q70Z53 315 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 MAATS1Q7Z4T9 603 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 MRGPRGQ86SM5 289 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 CTAGE3PQ8IX95 158 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 C9orf40Q8IXQ3 194 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ZNF595Q8IYB9 648 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 CYP4X1Q8N118 509 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ZNF808Q8N4W9 903 aaPredicted RBP5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ACOT4Q8N9L9 421 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 SNX31Q8N9S9 440 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 TTLQ8NG68 377 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 OR52N2Q8NGI0 321 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 HUS1BQ8NHY5 278 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 RHEBL1Q8TAI7 183 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 STAG3L4Q8TBR4 150 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 DOK4Q8TEW6 326 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 TSPAN17Q96FV3 270 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 VMP1Q96GC9 406 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 SCYL1Q96KG9 808 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 RASL10BQ96S79 203 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 EFCAB11Q9BUY7 163 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 EPB41L4BQ9H329 900 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 OR51B5Q9H339 312 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 CDC42EP4Q9H3Q1 356 aaKnown RBP5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ACSS3Q9H6R3 686 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 LYRM4Q9HD34 91 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 SEMA4BQ9NPR2 832 aaPredicted RBP5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 DMRT3Q9NQL9 472 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 SNX15Q9NRS6 342 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 PNO1Q9NRX1 252 aaKnown RBP5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 MYOTQ9UBF9 498 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 SH3BGRL2Q9UJC5 107 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ZNF225Q9UK10 706 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 NPIPA1Q9UND3 350 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ATG4BQ9Y4P1 393 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ASB4Q9Y574 426 aa5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 KLF2Q9Y5W3 355 aaPredicted RBP5.7□□□□□ -1.5
IGKV3D-25-201ENST00000519599 A0A096LPK6 155 aa5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 A0A1B0GTH9 108 aa5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 A0A1W2PR48 441 aa5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ARHGAP10A1A4S6 786 aa5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 URADA6NGE7 173 aa5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 ANKDD1BA6NHY2 528 aa5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 PRSS44E7EML9 344 aa5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 H0YIV9 168 aa5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 PPP6CO00743 305 aa5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 CLGNO14967 610 aa5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 HS6ST1O60243 411 aa5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 CCNT2O60583 730 aaKnown RBP5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 H2AFYO75367 372 aaKnown RBP5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 OR2J2O76002 312 aa5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 KLHL2O95198 593 aa5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 LTA4HP09960 611 aaKnown RBP5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 CTAGE8P0CG41 777 aa5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 IGFBP2P18065 325 aa5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 POU3F2P20265 443 aaPredicted RBP5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 CASQ1P31415 396 aa5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 STX2P32856 288 aa5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 SOX3P41225 446 aa5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 PIK3CGP48736 1102 aa5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 PER3P56645 1201 aa5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 TAS2R50P59544 299 aa5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 GPR85P60893 370 aa5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 RPS13P62277 151 aaKnown RBP5.69□□□□□ -1.5
IGKV3D-25-201ENST00000519599 SKP1P63208 163 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms