RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 NFATC3Q12968 1075 aa20.64■□□□□ 0.89
VEGFA-217ENST00000518538 CSTF3Q12996 717 aaKnown RBP20.64■□□□□ 0.89
VEGFA-217ENST00000518538 SLC13A2Q13183 592 aa20.64■□□□□ 0.89
VEGFA-217ENST00000518538 CASP8Q14790 479 aa20.64■□□□□ 0.89
VEGFA-217ENST00000518538 MRM1Q6IN84 353 aaKnown RBP20.64■□□□□ 0.89
VEGFA-217ENST00000518538 GPR180Q86V85 440 aa20.64■□□□□ 0.89
VEGFA-217ENST00000518538 METTL4Q8N3J2 472 aa20.64■□□□□ 0.89
VEGFA-217ENST00000518538 ZNF843Q8N446 348 aa20.64■□□□□ 0.89
VEGFA-217ENST00000518538 THOC3Q96J01 351 aaKnown RBP20.64■□□□□ 0.89
VEGFA-217ENST00000518538 KCNA7Q96RP8 456 aa20.64■□□□□ 0.89
VEGFA-217ENST00000518538 HBEGFQ99075 208 aa20.64■□□□□ 0.89
VEGFA-217ENST00000518538 LPAR4Q99677 370 aa20.64■□□□□ 0.89
VEGFA-217ENST00000518538 MRPL1Q9BYD6 325 aaKnown RBP20.64■□□□□ 0.89
VEGFA-217ENST00000518538 ZNF552Q9H707 407 aaPredicted RBP20.64■□□□□ 0.89
VEGFA-217ENST00000518538 LYARQ9NX58 379 aaKnown RBP20.64■□□□□ 0.89
VEGFA-217ENST00000518538 ADAM29Q9UKF5 820 aa20.64■□□□□ 0.89
VEGFA-217ENST00000518538 TIMM22Q9Y584 194 aa20.64■□□□□ 0.89
VEGFA-217ENST00000518538 SYNDIG1LA6NDD5 238 aa20.63■□□□□ 0.89
VEGFA-217ENST00000518538 TM9SF1O15321 606 aa20.63■□□□□ 0.89
VEGFA-217ENST00000518538 TMPRSS11DO60235 418 aa20.63■□□□□ 0.89
VEGFA-217ENST00000518538 HTR6P50406 440 aa20.63■□□□□ 0.89
VEGFA-217ENST00000518538 FOXA1P55317 472 aa20.63■□□□□ 0.89
VEGFA-217ENST00000518538 HNRNPH2P55795 449 aaKnown RBP20.63■□□□□ 0.89
VEGFA-217ENST00000518538 EXT1Q16394 746 aa20.63■□□□□ 0.89
VEGFA-217ENST00000518538 PLAG1Q6DJT9 500 aa20.63■□□□□ 0.89
VEGFA-217ENST00000518538 PAPD4Q6PIY7 484 aaKnown RBP20.63■□□□□ 0.89
VEGFA-217ENST00000518538 CYP20A1Q6UW02 462 aa20.63■□□□□ 0.89
VEGFA-217ENST00000518538 PAGE2Q7Z2X7 111 aa20.63■□□□□ 0.89
VEGFA-217ENST00000518538 HPS6Q86YV9 775 aa20.63■□□□□ 0.89
VEGFA-217ENST00000518538 EFCAB3Q8N7B9 438 aa20.63■□□□□ 0.89
VEGFA-217ENST00000518538 GBP7Q8N8V2 638 aaPredicted RBP20.63■□□□□ 0.89
VEGFA-217ENST00000518538 SREK1Q8WXA9 508 aaKnown RBP20.63■□□□□ 0.89
VEGFA-217ENST00000518538 C5AR2Q9P296 337 aa20.63■□□□□ 0.89
VEGFA-217ENST00000518538 CLDN16Q9Y5I7 305 aa20.63■□□□□ 0.89
VEGFA-217ENST00000518538 SERTM1A2A2V5 107 aa20.62■□□□□ 0.89
VEGFA-217ENST00000518538 GOLGA6L10A6NI86 522 aa20.62■□□□□ 0.89
VEGFA-217ENST00000518538 NPHS1O60500 1241 aa20.62■□□□□ 0.89
VEGFA-217ENST00000518538 CTNSO60931 367 aa20.62■□□□□ 0.89
VEGFA-217ENST00000518538 CRCPO75575 148 aa20.62■□□□□ 0.89
VEGFA-217ENST00000518538 BPGMP07738 259 aa20.62■□□□□ 0.89
VEGFA-217ENST00000518538 FAM58BPP0C7Q3 252 aa20.62■□□□□ 0.89
VEGFA-217ENST00000518538 TNFRSF17Q02223 184 aa20.62■□□□□ 0.89
VEGFA-217ENST00000518538 BTBD16Q32M84 506 aa20.62■□□□□ 0.89
VEGFA-217ENST00000518538 AGAP7PQ5VUJ5 663 aa20.62■□□□□ 0.89
VEGFA-217ENST00000518538 AGAP4Q96P64 663 aa20.62■□□□□ 0.89
VEGFA-217ENST00000518538 VPS29Q9UBQ0 182 aa20.62■□□□□ 0.89
VEGFA-217ENST00000518538 ATG4BQ9Y4P1 393 aa20.62■□□□□ 0.89
VEGFA-217ENST00000518538 ASB4Q9Y574 426 aa20.62■□□□□ 0.89
VEGFA-217ENST00000518538 ATRXP46100 2492 aa20.61■□□□□ 0.89
VEGFA-217ENST00000518538 TGFBR3LH3BV60 316 aa20.61■□□□□ 0.89
VEGFA-217ENST00000518538 GBAP04062 536 aa20.61■□□□□ 0.89
VEGFA-217ENST00000518538 CELA2AP08217 269 aa20.61■□□□□ 0.89
VEGFA-217ENST00000518538 TLX1P31314 330 aaPredicted RBP20.61■□□□□ 0.89
VEGFA-217ENST00000518538 BUD31P41223 144 aaPredicted RBP20.61■□□□□ 0.89
VEGFA-217ENST00000518538 GALNT1Q10472 559 aaPredicted RBP20.61■□□□□ 0.89
VEGFA-217ENST00000518538 TBL3Q12788 808 aaKnown RBP20.61■□□□□ 0.89
VEGFA-217ENST00000518538 JMJD6Q6NYC1 403 aaPredicted RBP20.61■□□□□ 0.89
VEGFA-217ENST00000518538 COMMD6Q7Z4G1 85 aa20.61■□□□□ 0.89
VEGFA-217ENST00000518538 CLNKQ7Z7G1 428 aa20.61■□□□□ 0.89
VEGFA-217ENST00000518538 M1APQ8TC57 530 aa20.61■□□□□ 0.89
VEGFA-217ENST00000518538 ACPTQ9BZG2 426 aa20.61■□□□□ 0.89
VEGFA-217ENST00000518538 SHCBP1LQ9BZQ2 653 aa20.61■□□□□ 0.89
VEGFA-217ENST00000518538 RPF2Q9H7B2 306 aaKnown RBP20.61■□□□□ 0.89
VEGFA-217ENST00000518538 TNFRSF12AQ9NP84 129 aa20.61■□□□□ 0.89
VEGFA-217ENST00000518538 ARGLU1Q9NWB6 273 aaPredicted RBP20.61■□□□□ 0.89
VEGFA-217ENST00000518538 PIEZO2Q9H5I5 2752 aa20.6■□□□□ 0.89
VEGFA-217ENST00000518538 ARHGAP10A1A4S6 786 aa20.6■□□□□ 0.89
VEGFA-217ENST00000518538 PROM1O43490 865 aa20.6■□□□□ 0.89
VEGFA-217ENST00000518538 ZWINTO95229 277 aa20.6■□□□□ 0.89
VEGFA-217ENST00000518538 KLK1P06870 262 aa20.6■□□□□ 0.89
VEGFA-217ENST00000518538 UROSP10746 265 aa20.6■□□□□ 0.89
VEGFA-217ENST00000518538 CHN1P15882 459 aa20.6■□□□□ 0.89
VEGFA-217ENST00000518538 TPP2P29144 1249 aaPredicted RBP20.6■□□□□ 0.89
VEGFA-217ENST00000518538 SERPINB4P48594 390 aa20.6■□□□□ 0.89
VEGFA-217ENST00000518538 SLC26A5P58743 744 aa20.6■□□□□ 0.89
VEGFA-217ENST00000518538 C19orf57Q0VDD7 668 aa20.6■□□□□ 0.89
VEGFA-217ENST00000518538 CUZD1Q86UP6 607 aa20.6■□□□□ 0.89
VEGFA-217ENST00000518538 PTRH1Q86Y79 214 aaKnown RBP20.6■□□□□ 0.89
VEGFA-217ENST00000518538 C7orf57Q8NEG2 295 aa20.6■□□□□ 0.89
VEGFA-217ENST00000518538 BRIX1Q8TDN6 353 aaKnown RBP20.6■□□□□ 0.89
VEGFA-217ENST00000518538 TMBIM4Q9HC24 238 aa20.6■□□□□ 0.89
VEGFA-217ENST00000518538 MMP25Q9NPA2 562 aa20.6■□□□□ 0.89
VEGFA-217ENST00000518538 A0A1W2PR48 441 aa20.59■□□□□ 0.89
VEGFA-217ENST00000518538 SAGE2PA6NJ88 616 aa20.59■□□□□ 0.89
VEGFA-217ENST00000518538 B8ZZF3 427 aa20.59■□□□□ 0.89
VEGFA-217ENST00000518538 DPM1O60762 260 aa20.59■□□□□ 0.89
VEGFA-217ENST00000518538 ITGAMP11215 1152 aa20.59■□□□□ 0.89
VEGFA-217ENST00000518538 PPP2R1BP30154 601 aa20.59■□□□□ 0.89
VEGFA-217ENST00000518538 SERPINB5P36952 375 aa20.59■□□□□ 0.89
VEGFA-217ENST00000518538 KLRB1Q12918 225 aa20.59■□□□□ 0.89
VEGFA-217ENST00000518538 SERTAD2Q14140 314 aa20.59■□□□□ 0.89
VEGFA-217ENST00000518538 TERF2Q15554 542 aa20.59■□□□□ 0.89
VEGFA-217ENST00000518538 CRB2Q5IJ48 1285 aa20.59■□□□□ 0.89
VEGFA-217ENST00000518538 CCNYL2Q5T2Q4 361 aa20.59■□□□□ 0.89
VEGFA-217ENST00000518538 C18orf63Q68DL7 685 aa20.59■□□□□ 0.89
VEGFA-217ENST00000518538 IGFL3Q6UXB1 125 aa20.59■□□□□ 0.89
VEGFA-217ENST00000518538 ZCCHC23Q6ZST2 131 aa20.59■□□□□ 0.89
VEGFA-217ENST00000518538 NUDCD3Q8IVD9 361 aa20.59■□□□□ 0.89
VEGFA-217ENST00000518538 C1orf52Q8N6N3 182 aaKnown RBP20.59■□□□□ 0.89
VEGFA-217ENST00000518538 AMER2Q8N7J2 671 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms