RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 HSPA14Q0VDF9 509 aa5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 DHX34Q14147 1143 aaKnown RBP5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 CAMK4Q16566 473 aa5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 POM121L1PQ3SYA9 428 aa5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 ZNF542PQ5EBM4 170 aa5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 FBXO48Q5FWF7 155 aa5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 ARMCX4Q5H9R4 360 aa5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 SEL1L3Q68CR1 1132 aa5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 C11orf87Q6NUJ2 197 aa5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 SERINC5Q86VE9 423 aa5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 OFCC1Q8IZS5 231 aa5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 LGI2Q8N0V4 545 aa5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 UBE2J2Q8N2K1 259 aa5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 GBGT1Q8N5D6 347 aa5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 CPSF7Q8N684 471 aaKnown RBP5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 OR4L1Q8NH43 312 aa5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 SPATA22Q8NHS9 363 aa5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 PPP4R1Q8TF05 950 aa5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 EMG1Q92979 244 aaKnown RBP5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 C11orf24Q96F05 449 aaPredicted RBP5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 SENP5Q96HI0 755 aaPredicted RBP5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 RBM41Q96IZ5 413 aaKnown RBP5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 CCNL2Q96S94 520 aaPredicted RBP5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 RTP3Q9BQQ7 232 aa5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 LRRC2Q9BYS8 371 aa5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 ARRDC1-AS1Q9H2J1 176 aa5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 PNNQ9H307 717 aaKnown RBP5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 XKR8Q9H6D3 395 aa5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 RNF14Q9UBS8 474 aa5.19□□□□□ -1.58
CTNNA1-202ENST00000517533 TEX13DA0A0J9YY54 714 aaPredicted RBP5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 CCDC162PA2VCL2 907 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 RNF222A6NCQ9 220 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 WASH3PC4AMC7 463 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 NPIPA2E9PIF3 369 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 SYT7O43581 403 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 FCMRO60667 390 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 BCAS1O75363 584 aaPredicted RBP5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 SYF2O95926 243 aaKnown RBP5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 TOMM40O96008 361 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 RALBP11234 206 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 CD38P28907 300 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 CDC25AP30304 524 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 HSD17B2P37059 387 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 MAGEA1P43355 309 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 AMTP48728 403 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 VAMP7P51809 220 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 GEMP55040 296 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 RPL23AP62750 156 aaKnown RBP5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 RPP38P78345 283 aaKnown RBP5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 P2RY14Q15391 338 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 PCK2Q16822 640 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 MPPE1Q53F39 396 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 PXDC1Q5TGL8 231 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 LIPJQ5W064 366 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 ZSCAN25Q6NSZ9 544 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 SYCE2Q6PIF2 218 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 RAD9BQ6WBX8 426 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 KDM7AQ6ZMT4 941 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 KIF6Q6ZMV9 814 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 TRMT1LQ7Z2T5 733 aaKnown RBP5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 CPEB2Q7Z5Q1 589 aaKnown RBP5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 CBWD2Q8IUF1 395 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 TMEM139Q8IV31 216 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 WDR49Q8IV35 697 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 SLC43A2Q8N370 569 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 PGBD5Q8N414 524 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 OR9K2Q8NGE7 335 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 THAP6Q8TBB0 222 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 SLC22A8Q8TCC7 542 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 SLC2A14Q8TDB8 520 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 WFIKKN2Q8TEU8 576 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 GIPC3Q8TF64 312 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 SLC38A5Q8WUX1 472 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 DNAJA4Q8WW22 397 aaPredicted RBP5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 IRGQQ8WZA9 623 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 SEPT8Q92599 483 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 TSACCQ96A04 125 aaPredicted RBP5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 VPS35Q96QK1 796 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 CITED1Q99966 193 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 NUP58Q9BVL2 599 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 KRTAP4-7Q9BYR0 210 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 LRRCC1Q9C099 1032 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 RAB18Q9NP72 206 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 SPATA7Q9P0W8 599 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 MRPL11Q9Y3B7 192 aaKnown RBP5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 OR10H1Q9Y4A9 318 aa5.18□□□□□ -1.58
CTNNA1-202ENST00000517533 A0A1B0GTQ1 180 aa5.17□□□□□ -1.58
CTNNA1-202ENST00000517533 LINC01553A4QN01 128 aa5.17□□□□□ -1.58
CTNNA1-202ENST00000517533 METTL21EPA6NDL7 271 aa5.17□□□□□ -1.58
CTNNA1-202ENST00000517533 PPIAL4DF5H284 164 aa5.17□□□□□ -1.58
CTNNA1-202ENST00000517533 GAPDHSO14556 408 aaPredicted RBP5.17□□□□□ -1.58
CTNNA1-202ENST00000517533 ARPC3O15145 178 aa5.17□□□□□ -1.58
CTNNA1-202ENST00000517533 OR1F1O43749 312 aa5.17□□□□□ -1.58
CTNNA1-202ENST00000517533 RAF1P04049 648 aa5.17□□□□□ -1.58
CTNNA1-202ENST00000517533 OR8G3PP0DMU2 310 aa5.17□□□□□ -1.58
CTNNA1-202ENST00000517533 SLC2A3P11169 496 aa5.17□□□□□ -1.58
CTNNA1-202ENST00000517533 ZNF44P15621 663 aa5.17□□□□□ -1.58
CTNNA1-202ENST00000517533 TPSB2P20231 275 aa5.17□□□□□ -1.58
CTNNA1-202ENST00000517533 CBLP22681 906 aa5.17□□□□□ -1.58
CTNNA1-202ENST00000517533 SLC11A1P49279 550 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms