RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 LGI2Q8N0V4 545 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 C1orf52Q8N6N3 182 aaKnown RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 MAB21L3Q8N8X9 362 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 DDHD1Q8NEL9 900 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 OR13F1Q8NGS4 319 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 ZNF596Q8TC21 504 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 LRRC20Q8TCA0 184 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 CD300LFQ8TDQ1 290 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 PDCD6IPQ8WUM4 868 aaKnown RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 DNAAF4Q8WXU2 420 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 DAZLQ92904 295 aaKnown RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 COQ2Q96H96 371 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 TECTBQ96PL2 329 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 KXD1Q9BQD3 176 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 AIFM2Q9BRQ8 373 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 UBAC1Q9BSL1 405 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 WRAP53Q9BUR4 548 aaKnown RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 C1QTNF3Q9BXJ4 246 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 ANKRD60Q9BZ19 345 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 IRX2Q9BZI1 471 aaPredicted RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 SPRTNQ9H040 489 aaPredicted RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 ZMYND12Q9H0C1 365 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 RHBGQ9H310 441 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 DHX33Q9H6R0 707 aaKnown RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 AAMDCQ9H7C9 122 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 Q9H8V8 135 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 MOV10Q9HCE1 1003 aaKnown RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 PNO1Q9NRX1 252 aaKnown RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 GKN1Q9NS71 199 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 MIOSQ9NXC5 875 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 PTTG3PQ9NZH4 202 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 ERVK-18Q9QC07 812 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 ADAM21Q9UKJ8 722 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 ZNF346Q9UL40 294 aaKnown RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 TBC1D24Q9ULP9 559 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 IRAK3Q9Y616 596 aa3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 SPIN1Q9Y657 262 aaPredicted RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 ATXN2Q99700 1313 aaKnown RBP3.67□□□□□ -1.82
RNU4-60P-201ENST00000517239 SBNO1A3KN83 1393 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 TRAV6A0A075B6T7 132 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 A0A1W2PPC1 479 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 ESYT2A0FGR8 921 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 RNF222A6NCQ9 220 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 TUBAL3A6NHL2 446 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 CD8B2A6NJW9 211 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 SNTNA6NMZ2 147 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 TMCO5BA8MYB1 307 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 BTBD19C9JJ37 291 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 C9JVG2 144 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 HIP1O00291 1037 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 MDM4O15151 490 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 INPPL1O15357 1258 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 ZSCAN12O43309 604 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 TLX3O43711 291 aaPredicted RBP3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 DFFBO76075 338 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 SORBS2O94875 1100 aaKnown RBP3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 SMC2O95347 1197 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 ANP32DO95626 131 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 WDPCPO95876 746 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 FTH1P02794 183 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 OPN1LWP04000 364 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 WNT1P04628 370 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 GSTT2P0CG29 244 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 GSTT2BP0CG30 244 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 GP9P14770 177 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 CYP11B1P15538 503 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 FCARP24071 287 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 ALDH1B1P30837 517 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 CNR2P34972 360 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 CYLC1P35663 651 aaPredicted RBP3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 AVPR1AP37288 418 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 MNDAP41218 407 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 GLIPR1P48060 266 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 PPP3CCP48454 512 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 BLVRAP53004 296 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 CTSWP56202 376 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 MRPS15P82914 257 aaKnown RBP3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 SP3Q02447 781 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 ZNF415Q09FC8 603 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 TMEM44Q2T9K0 475 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 TIGD2Q4W5G0 525 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 BEX5Q5H9J7 111 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 CTSL3PQ5NE16 218 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 GRTP1Q5TC63 336 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 FRG2Q64ET8 278 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 WASH2PQ6VEQ5 465 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 SHFQ7M4L6 423 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 SPRED1Q7Z699 444 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 LINC00523Q86TU6 105 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 ADHFE1Q8IWW8 467 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 CCDC65Q8IXS2 484 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 MICU2Q8IYU8 434 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 CEP112Q8N8E3 955 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 CNBD1Q8NA66 436 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 NOA1Q8NC60 698 aaKnown RBP3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 ACVR1CQ8NER5 493 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 OR4K14Q8NGD5 310 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 M1APQ8TC57 530 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 PPP4R1Q8TF05 950 aa3.66□□□□□ -1.82
RNU4-60P-201ENST00000517239 GLYATL2Q8WU03 294 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms