RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 TOMM70O94826 608 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 EIF2S1P05198 315 aaKnown RBP-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 IGHV4-34P06331 123 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 YES1P07947 543 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 CCDC159P0C7I6 412 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 RBMY1DP0C7P1 496 aaKnown RBP-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 DUX4L2P0CJ85 424 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 DUX4L3P0CJ86 424 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 DUX4L5P0CJ88 424 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 DUX4L6P0CJ89 424 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 DUX4L7P0CJ90 424 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 RCC1P18754 421 aaPredicted RBP-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 DUTP33316 252 aaKnown RBP-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 BSGP35613 385 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 GNALP38405 381 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 HTR3AP46098 478 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 TFPI2P48307 235 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 CLDN15P56746 228 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 ACTA1P68133 377 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 TMF1P82094 1093 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 CXCL9Q07325 125 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 SERTAD2Q14140 314 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 KIAA0930Q6ICG6 404 aaPredicted RBP-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 MFSD12Q6NUT3 480 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 SLC27A4Q6P1M0 643 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 TEX38Q6PEX7 206 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 DUX4L9Q6RFH8 374 aaPredicted RBP-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 CEP57Q86XR8 500 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 RASGEF1AQ8N9B8 481 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 SUMF2Q8NBJ7 301 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 ZBTB44Q8NCP5 570 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 OR10G2Q8NGC3 310 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 CCDC26Q8TAB7 109 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 UBALD1Q8TB05 177 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 ARHGEF2Q92974 986 aaKnown RBP-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 SNRNP40Q96DI7 357 aaKnown RBP-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 SPDL1Q96EA4 605 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 MAELQ96JY0 434 aaKnown RBP-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 C8orf48Q96LL4 319 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 NDNQ99608 321 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 PRRG4Q9BZD6 226 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 NT5DC2Q9H857 520 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 PLCB1Q9NQ66 1216 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 MMP26Q9NRE1 261 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 CLIC5Q9NZA1 410 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 DPM3Q9P2X0 92 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 DUX4Q9UBX2 424 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 ERVW-1Q9UQF0 538 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 PLA2R1Q13018 1463 aa-0.38□□□□□ -2.47
SCARNA23-201ENST00000516060 hCG_1642624A0A1W2PR95 340 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 NKX2-6A6NCS4 301 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 RPL36A-HNRNPH2H7BZ11 118 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 GFYI3L273 518 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 IMPA2O14732 288 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 BET1O15155 118 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 MBD4O95243 580 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 IFIT2P09913 472 aaKnown RBP-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 HSD17B1P14061 328 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 CYP11B1P15538 503 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 PDGFRAP16234 1089 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 DNASE1P24855 282 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 SFTPDP35247 375 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 RGS2P41220 211 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 NRIP1P48552 1158 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 CCR6P51684 374 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 ZNF75DP51815 510 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 KRTAP10-4P60372 401 aaPredicted RBP-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 VAMP2P63027 116 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 GSTO1P78417 241 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 RALGDSQ12967 914 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 GRB14Q14449 540 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 ANKRD55Q3KP44 614 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 HYIQ5T013 277 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 DHRS11Q6UWP2 260 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 LRRTM4Q86VH4 590 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 GCNT2Q8N0V5 402 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 OR10H4Q8NGA5 316 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 SLAMF9Q96A28 289 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 LRRC59Q96AG4 307 aaKnown RBP-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 LRRC58Q96CX6 371 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 HVCN1Q96D96 273 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 CDHR1Q96JP9 859 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 MS4A10Q96PG2 267 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 PCDHB18PQ96TA0 734 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 STACQ99469 402 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 SPAG8Q99932 426 aaPredicted RBP-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 SRSF8Q9BRL6 282 aaKnown RBP-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 ACEP12821 1306 aa-0.39□□□□□ -2.47
SCARNA23-201ENST00000516060 LRP4O75096 1905 aa-0.4□□□□□ -2.47
SCARNA23-201ENST00000516060 SUPT7LO94864 414 aa-0.4□□□□□ -2.47
SCARNA23-201ENST00000516060 TIMP1P01033 207 aa-0.4□□□□□ -2.47
SCARNA23-201ENST00000516060 FCGR3AP08637 254 aa-0.4□□□□□ -2.47
SCARNA23-201ENST00000516060 RHOXF2BP0C7M4 288 aa-0.4□□□□□ -2.47
SCARNA23-201ENST00000516060 FOSL2P15408 326 aa-0.4□□□□□ -2.47
SCARNA23-201ENST00000516060 MUC1P15941 1255 aaPredicted RBP-0.4□□□□□ -2.47
SCARNA23-201ENST00000516060 HNF1AP20823 631 aa-0.4□□□□□ -2.47
SCARNA23-201ENST00000516060 PPP2R1BP30154 601 aa-0.4□□□□□ -2.47
SCARNA23-201ENST00000516060 ARHGDIAP52565 204 aa-0.4□□□□□ -2.47
SCARNA23-201ENST00000516060 SLC7A2P52569 658 aa-0.4□□□□□ -2.47
SCARNA23-201ENST00000516060 ACTA2P62736 377 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms