RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 PRAMEF4O60810 478 aa17.04■□□□□ 0.32
SPOP-220ENST00000515508 WISP3O95389 354 aaPredicted RBP17.04■□□□□ 0.32
SPOP-220ENST00000515508 IFNA16P05015 189 aa17.04■□□□□ 0.32
SPOP-220ENST00000515508 GGT5P36269 586 aa17.04■□□□□ 0.32
SPOP-220ENST00000515508 HYAL4Q2M3T9 481 aa17.04■□□□□ 0.32
SPOP-220ENST00000515508 KRTAP21-3Q3LHN1 58 aa17.04■□□□□ 0.32
SPOP-220ENST00000515508 PRAMEF9Q5VWM5 478 aa17.04■□□□□ 0.32
SPOP-220ENST00000515508 RTL4Q6ZR62 310 aa17.04■□□□□ 0.32
SPOP-220ENST00000515508 SYDE1Q6ZW31 735 aaPredicted RBP17.04■□□□□ 0.32
SPOP-220ENST00000515508 TCAIMQ8N3R3 496 aa17.04■□□□□ 0.32
SPOP-220ENST00000515508 FAM109AQ8N4B1 249 aa17.04■□□□□ 0.32
SPOP-220ENST00000515508 WDR34Q96EX3 536 aa17.04■□□□□ 0.32
SPOP-220ENST00000515508 VPS39Q96JC1 886 aa17.04■□□□□ 0.32
SPOP-220ENST00000515508 SCYL1Q96KG9 808 aa17.04■□□□□ 0.32
SPOP-220ENST00000515508 CAPZA3Q96KX2 299 aa17.04■□□□□ 0.32
SPOP-220ENST00000515508 FAM173AQ9BQD7 235 aa17.04■□□□□ 0.32
SPOP-220ENST00000515508 ZNF559Q9BR84 538 aa17.04■□□□□ 0.32
SPOP-220ENST00000515508 DERL2Q9GZP9 239 aa17.04■□□□□ 0.32
SPOP-220ENST00000515508 RHOJQ9H4E5 214 aa17.04■□□□□ 0.32
SPOP-220ENST00000515508 COPS7BQ9H9Q2 264 aaPredicted RBP17.04■□□□□ 0.32
SPOP-220ENST00000515508 SLC24A3Q9HC58 644 aa17.04■□□□□ 0.32
SPOP-220ENST00000515508 IGSF5Q9NSI5 407 aa17.04■□□□□ 0.32
SPOP-220ENST00000515508 FAM215AQ9Y5M1 114 aa17.04■□□□□ 0.32
SPOP-220ENST00000515508 MAP1AP78559 2803 aaPredicted RBP17.03■□□□□ 0.32
SPOP-220ENST00000515508 NCF1BA6NI72 391 aaPredicted RBP17.03■□□□□ 0.32
SPOP-220ENST00000515508 NCF1CA8MVU1 366 aaPredicted RBP17.03■□□□□ 0.32
SPOP-220ENST00000515508 TP73O15350 636 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 TAPBPO15533 448 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 KLK8O60259 260 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 NCF1P14598 390 aaPredicted RBP17.03■□□□□ 0.32
SPOP-220ENST00000515508 CNR1P21554 472 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 MAGEA5P43359 124 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 ARL4CP56559 192 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 RNF4P78317 190 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 FOXO1Q12778 655 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 ZNF750Q32MQ0 723 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 TRILQ7L0X0 811 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 TMEM200AQ86VY9 491 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 CLYBLQ8N0X4 340 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 TMEM251Q8N6I4 163 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 ZNF321PQ8N8H1 164 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 OR5M9Q8NGP3 310 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 SLC2A12Q8TD20 617 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 KIAA1191Q96A73 305 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 PTCD3Q96EY7 689 aaKnown RBP17.03■□□□□ 0.32
SPOP-220ENST00000515508 SGCZQ96LD1 299 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 TTYH2Q9BSA4 534 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 ALOXE3Q9BYJ1 711 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 IL1RL2Q9HB29 575 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 LYRM4Q9HD34 91 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 PRDM7Q9NQW5 492 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 DNAJC11Q9NVH1 559 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 NSMCE4AQ9NXX6 385 aa17.03■□□□□ 0.32
SPOP-220ENST00000515508 ZNF490Q9ULM2 529 aaPredicted RBP17.03■□□□□ 0.32
SPOP-220ENST00000515508 ANKHD1Q8IWZ3 2542 aaKnown RBP17.03■□□□□ 0.32
SPOP-220ENST00000515508 HRNRQ86YZ3 2850 aaPredicted RBP17.02■□□□□ 0.32
SPOP-220ENST00000515508 G3V3Y1 287 aa17.02■□□□□ 0.32
SPOP-220ENST00000515508 AQP7O14520 342 aa17.02■□□□□ 0.32
SPOP-220ENST00000515508 ZNF354AO60765 605 aaPredicted RBP17.02■□□□□ 0.32
SPOP-220ENST00000515508 CD22P20273 847 aa17.02■□□□□ 0.32
SPOP-220ENST00000515508 KCNC1P48547 511 aa17.02■□□□□ 0.32
SPOP-220ENST00000515508 ART1P52961 327 aa17.02■□□□□ 0.32
SPOP-220ENST00000515508 TGM3Q08188 693 aa17.02■□□□□ 0.32
SPOP-220ENST00000515508 STX4Q12846 297 aa17.02■□□□□ 0.32
SPOP-220ENST00000515508 ILF2Q12905 390 aaKnown RBP17.02■□□□□ 0.32
SPOP-220ENST00000515508 SERTAD2Q14140 314 aa17.02■□□□□ 0.32
SPOP-220ENST00000515508 FASTKD3Q14CZ7 662 aaKnown RBP17.02■□□□□ 0.32
SPOP-220ENST00000515508 CDKL4Q5MAI5 379 aa17.02■□□□□ 0.32
SPOP-220ENST00000515508 CES4AQ5XG92 561 aa17.02■□□□□ 0.32
SPOP-220ENST00000515508 RTL6Q6ICC9 239 aa17.02■□□□□ 0.32
SPOP-220ENST00000515508 B3GNT6Q6ZMB0 384 aa17.02■□□□□ 0.32
SPOP-220ENST00000515508 ANKMY2Q8IV38 441 aa17.02■□□□□ 0.32
SPOP-220ENST00000515508 FBXO36Q8NEA4 188 aa17.02■□□□□ 0.32
SPOP-220ENST00000515508 KCNC2Q96PR1 638 aa17.02■□□□□ 0.32
SPOP-220ENST00000515508 EFCAB11Q9BUY7 163 aa17.02■□□□□ 0.32
SPOP-220ENST00000515508 OR8D2Q9GZM6 311 aa17.02■□□□□ 0.32
SPOP-220ENST00000515508 CNOT10Q9H9A5 744 aaKnown RBP17.02■□□□□ 0.32
SPOP-220ENST00000515508 SACM1LQ9NTJ5 587 aa17.02■□□□□ 0.32
SPOP-220ENST00000515508 WWOXQ9NZC7 414 aa17.02■□□□□ 0.32
SPOP-220ENST00000515508 MYOCOSA0A1B0GUC4 107 aa17.01■□□□□ 0.31
SPOP-220ENST00000515508 C17orf105B2RV13 164 aa17.01■□□□□ 0.31
SPOP-220ENST00000515508 E7ESA3 106 aa17.01■□□□□ 0.31
SPOP-220ENST00000515508 CLGNO14967 610 aa17.01■□□□□ 0.31
SPOP-220ENST00000515508 SUSD5O60279 629 aa17.01■□□□□ 0.31
SPOP-220ENST00000515508 WDR1O75083 606 aa17.01■□□□□ 0.31
SPOP-220ENST00000515508 LDB3O75112 727 aa17.01■□□□□ 0.31
SPOP-220ENST00000515508 SEC31AO94979 1220 aaKnown RBP17.01■□□□□ 0.31
SPOP-220ENST00000515508 SCELO95171 688 aa17.01■□□□□ 0.31
SPOP-220ENST00000515508 GLI4P10075 376 aa17.01■□□□□ 0.31
SPOP-220ENST00000515508 CCL3P10147 92 aa17.01■□□□□ 0.31
SPOP-220ENST00000515508 DNAJA1P31689 397 aaKnown RBP17.01■□□□□ 0.31
SPOP-220ENST00000515508 ZFP36L2P47974 494 aaKnown RBP17.01■□□□□ 0.31
SPOP-220ENST00000515508 DOC2AQ14183 400 aa17.01■□□□□ 0.31
SPOP-220ENST00000515508 E2F2Q14209 437 aa17.01■□□□□ 0.31
SPOP-220ENST00000515508 ZNF585AQ6P3V2 769 aa17.01■□□□□ 0.31
SPOP-220ENST00000515508 OPN5Q6U736 354 aa17.01■□□□□ 0.31
SPOP-220ENST00000515508 ZNF793Q6ZN11 406 aa17.01■□□□□ 0.31
SPOP-220ENST00000515508 FAM47EQ6ZV65 393 aa17.01■□□□□ 0.31
SPOP-220ENST00000515508 OR5L2Q8NGL0 311 aa17.01■□□□□ 0.31
SPOP-220ENST00000515508 SREK1Q8WXA9 508 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms