RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 C19orf57Q0VDD7 668 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 NFATC3Q12968 1075 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 SLC13A2Q13183 592 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 MPP2Q14168 576 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 MYBPC3Q14896 1274 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 LACTB2Q53H82 288 aaPredicted RBP13.1□□□□□ -0.31
USP46-209ENST00000514536 CYP20A1Q6UW02 462 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 ZCCHC23Q6ZST2 131 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 ASB18Q6ZVZ8 466 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 CLNKQ7Z7G1 428 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 SCUBE1Q8IWY4 988 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 METTL4Q8N3J2 472 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 EFCAB3Q8N7B9 438 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 WDR77Q9BQA1 342 aaPredicted RBP13.1□□□□□ -0.31
USP46-209ENST00000514536 TUBB6Q9BUF5 446 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 LHPPQ9H008 270 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 STMN4Q9H169 189 aaPredicted RBP13.1□□□□□ -0.31
USP46-209ENST00000514536 ZNF552Q9H707 407 aaPredicted RBP13.1□□□□□ -0.31
USP46-209ENST00000514536 ARGLU1Q9NWB6 273 aaPredicted RBP13.1□□□□□ -0.31
USP46-209ENST00000514536 NMRK1Q9NWW6 199 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 VPS29Q9UBQ0 182 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 ATG4BQ9Y4P1 393 aa13.1□□□□□ -0.31
USP46-209ENST00000514536 MYOCOSA0A1B0GUC4 107 aa13.09□□□□□ -0.31
USP46-209ENST00000514536 TCRBV16S1A1N1A0A5B0 115 aa13.09□□□□□ -0.31
USP46-209ENST00000514536 A8MUA0 341 aa13.09□□□□□ -0.31
USP46-209ENST00000514536 NPHS1O60500 1241 aa13.09□□□□□ -0.31
USP46-209ENST00000514536 CTNSO60931 367 aa13.09□□□□□ -0.31
USP46-209ENST00000514536 PRR35P0CG20 571 aa13.09□□□□□ -0.31
USP46-209ENST00000514536 HSD3B1P14060 373 aa13.09□□□□□ -0.31
USP46-209ENST00000514536 HSD3B2P26439 372 aa13.09□□□□□ -0.31
USP46-209ENST00000514536 SERPINB4P48594 390 aa13.09□□□□□ -0.31
USP46-209ENST00000514536 PGDP52209 483 aa13.09□□□□□ -0.31
USP46-209ENST00000514536 CSTF3Q12996 717 aaKnown RBP13.09□□□□□ -0.31
USP46-209ENST00000514536 IRAK1BP1Q5VVH5 260 aa13.09□□□□□ -0.31
USP46-209ENST00000514536 C18orf63Q68DL7 685 aa13.09□□□□□ -0.31
USP46-209ENST00000514536 MRM1Q6IN84 353 aaKnown RBP13.09□□□□□ -0.31
USP46-209ENST00000514536 PAPD4Q6PIY7 484 aaKnown RBP13.09□□□□□ -0.31
USP46-209ENST00000514536 CUZD1Q86UP6 607 aa13.09□□□□□ -0.31
USP46-209ENST00000514536 NUDT13Q86X67 352 aa13.09□□□□□ -0.31
USP46-209ENST00000514536 PTRH1Q86Y79 214 aaKnown RBP13.09□□□□□ -0.31
USP46-209ENST00000514536 NUDCD3Q8IVD9 361 aa13.09□□□□□ -0.31
USP46-209ENST00000514536 KBTBD2Q8IY47 623 aa13.09□□□□□ -0.31
USP46-209ENST00000514536 SREK1Q8WXA9 508 aaKnown RBP13.09□□□□□ -0.31
USP46-209ENST00000514536 PKNOX2Q96KN3 472 aa13.09□□□□□ -0.31
USP46-209ENST00000514536 LPAR4Q99677 370 aa13.09□□□□□ -0.31
USP46-209ENST00000514536 TRMOQ9BU70 441 aa13.09□□□□□ -0.31
USP46-209ENST00000514536 MS4A12Q9NXJ0 267 aa13.09□□□□□ -0.31
USP46-209ENST00000514536 PHF11Q9UIL8 331 aa13.09□□□□□ -0.31
USP46-209ENST00000514536 ASB4Q9Y574 426 aa13.09□□□□□ -0.31
USP46-209ENST00000514536 ATMQ13315 3056 aa13.09□□□□□ -0.31
USP46-209ENST00000514536 TGFBR3LH3BV60 316 aa13.08□□□□□ -0.32
USP46-209ENST00000514536 TM9SF1O15321 606 aa13.08□□□□□ -0.32
USP46-209ENST00000514536 PROM1O43490 865 aa13.08□□□□□ -0.32
USP46-209ENST00000514536 SERPINA7P05543 415 aa13.08□□□□□ -0.32
USP46-209ENST00000514536 CHRNGP07510 517 aa13.08□□□□□ -0.32
USP46-209ENST00000514536 UROSP10746 265 aa13.08□□□□□ -0.32
USP46-209ENST00000514536 ICAM2P13598 275 aa13.08□□□□□ -0.32
USP46-209ENST00000514536 H2AFXP16104 143 aaPredicted RBP13.08□□□□□ -0.32
USP46-209ENST00000514536 TPP2P29144 1249 aaPredicted RBP13.08□□□□□ -0.32
USP46-209ENST00000514536 TLX1P31314 330 aaPredicted RBP13.08□□□□□ -0.32
USP46-209ENST00000514536 MAGOHP61326 146 aaKnown RBP13.08□□□□□ -0.32
USP46-209ENST00000514536 HMGCS1Q01581 520 aa13.08□□□□□ -0.32
USP46-209ENST00000514536 ZNF33BQ06732 778 aa13.08□□□□□ -0.32
USP46-209ENST00000514536 TBL3Q12788 808 aaKnown RBP13.08□□□□□ -0.32
USP46-209ENST00000514536 BTBD16Q32M84 506 aa13.08□□□□□ -0.32
USP46-209ENST00000514536 ARL13AQ5H913 290 aaPredicted RBP13.08□□□□□ -0.32
USP46-209ENST00000514536 CCNYL2Q5T2Q4 361 aa13.08□□□□□ -0.32
USP46-209ENST00000514536 VWA5B1Q5TIE3 1220 aa13.08□□□□□ -0.32
USP46-209ENST00000514536 CLEC6AQ6EIG7 209 aa13.08□□□□□ -0.32
USP46-209ENST00000514536 PAGE2Q7Z2X7 111 aa13.08□□□□□ -0.32
USP46-209ENST00000514536 COMMD6Q7Z4G1 85 aa13.08□□□□□ -0.32
USP46-209ENST00000514536 ZNF843Q8N446 348 aa13.08□□□□□ -0.32
USP46-209ENST00000514536 C1orf52Q8N6N3 182 aaKnown RBP13.08□□□□□ -0.32
USP46-209ENST00000514536 GBP7Q8N8V2 638 aaPredicted RBP13.08□□□□□ -0.32
USP46-209ENST00000514536 CHTF18Q8WVB6 975 aa13.08□□□□□ -0.32
USP46-209ENST00000514536 SMAD5Q99717 465 aaKnown RBP13.08□□□□□ -0.32
USP46-209ENST00000514536 ALOXE3Q9BYJ1 711 aa13.08□□□□□ -0.32
USP46-209ENST00000514536 ACPTQ9BZG2 426 aa13.08□□□□□ -0.32
USP46-209ENST00000514536 PNO1Q9NRX1 252 aaKnown RBP13.08□□□□□ -0.32
USP46-209ENST00000514536 LYARQ9NX58 379 aaKnown RBP13.08□□□□□ -0.32
USP46-209ENST00000514536 ADAM29Q9UKF5 820 aa13.08□□□□□ -0.32
USP46-209ENST00000514536 ZNF451Q9Y4E5 1061 aa13.08□□□□□ -0.32
USP46-209ENST00000514536 CLDN16Q9Y5I7 305 aa13.08□□□□□ -0.32
USP46-209ENST00000514536 PIEZO2Q9H5I5 2752 aa13.08□□□□□ -0.32
USP46-209ENST00000514536 A0A1W2PR48 441 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 ARHGAP10A1A4S6 786 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 WASHC1A8K0Z3 465 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 KLHL41O60662 606 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 LDB3O75112 727 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 PRKRAO75569 313 aaKnown RBP13.07□□□□□ -0.32
USP46-209ENST00000514536 ZWINTO95229 277 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 ITGAMP11215 1152 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 PPP2R1BP30154 601 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 ID2Q02363 134 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 BTKQ06187 659 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 GALNT1Q10472 559 aaPredicted RBP13.07□□□□□ -0.32
USP46-209ENST00000514536 AGAP7PQ5VUJ5 663 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 PLAG1Q6DJT9 500 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 HDXQ7Z353 690 aa13.07□□□□□ -0.32
USP46-209ENST00000514536 OR4N5Q8IXE1 308 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms