RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 SLC44A1Q8WWI5 657 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 ITLN2Q8WWU7 325 aaPredicted RBP9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 TMEM125Q96AQ2 219 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 MRRFQ96E11 262 aaKnown RBP9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 CCDC120Q96HB5 630 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 CCDC77Q9BR77 488 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 TSPAN10Q9H1Z9 355 aaPredicted RBP9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 DMRT3Q9NQL9 472 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 SUCOQ9UBS9 1254 aaKnown RBP9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 VTI1BQ9UEU0 232 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 MTRF1LQ9UGC7 380 aaKnown RBP9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 ADGRE2Q9UHX3 823 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 FBXW2Q9UKT8 454 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 ZNF835Q9Y2P0 537 aa9.74□□□□□ -0.85
HMGXB3-205ENST00000514469 POLEQ07864 2286 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 SCN2AQ99250 2005 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 SPTBN1Q01082 2364 aaKnown RBP9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 LRRC14BA6NHZ5 514 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 NPIPA5E9PKD4 350 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 H0YIV9 168 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 SAP18O00422 153 aaKnown RBP9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 PLPP1O14494 284 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 LDB3O75112 727 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 SH3BGRLO75368 114 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 ZFAND5O76080 213 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 ACSL3O95573 720 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 TGFB1P01137 390 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 ZNF24P17028 368 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 TYK2P29597 1187 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 PIK3CGP48736 1102 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 SSR4P51571 173 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 ARFIP1P53367 373 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 IGLV3-21P80748 117 aaPredicted RBP9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 STX4Q12846 297 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 SERTAD2Q14140 314 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 C3AR1Q16581 482 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 AP5B1Q2VPB7 878 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 RNFT1Q5M7Z0 435 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 DEPDC1Q5TB30 811 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 MTFR2Q6P444 385 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 GOLGA7Q7Z5G4 137 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 CHERPQ8IWX8 916 aaKnown RBP9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 GPALPP1Q8IXQ4 340 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 CYP4Z2PQ8N1L4 340 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 ZCCHC7Q8N3Z6 543 aaKnown RBP9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 RNF175Q8N4F7 328 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 POGLUT1Q8NBL1 392 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 MORN4Q8NDC4 146 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 HUS1BQ8NHY5 278 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 PTPMT1Q8WUK0 201 aaPredicted RBP9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 DAZLQ92904 295 aaKnown RBP9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 ANKRD9Q96BM1 317 aaPredicted RBP9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 MAGED4Q96JG8 741 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 PAFAH2Q99487 392 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 FMO2Q99518 471 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 SORBS1Q9BX66 1292 aaKnown RBP9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 ZNF717Q9BY31 904 aaPredicted RBP9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 ALOXE3Q9BYJ1 711 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 TSPYL1Q9H0U9 437 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 OR51B5Q9H339 312 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 ACTR8Q9H981 624 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 SH3BGRL2Q9UJC5 107 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 NPIPA1Q9UND3 350 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 KLF13Q9Y2Y9 288 aaPredicted RBP9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 YARS2Q9Y2Z4 477 aaKnown RBP9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 ANGPTL3Q9Y5C1 460 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 PCDHGA11Q9Y5H2 935 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 CLCA3PQ9Y6N3 262 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 SPACA6W5XKT8 324 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 ICE1Q9Y2F5 2266 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 LRBAP50851 2863 aa9.73□□□□□ -0.85
HMGXB3-205ENST00000514469 MYOCOSA0A1B0GUC4 107 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 CCL21O00585 134 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 ASNA1O43681 348 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 FGF17O60258 216 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 OR2J2O76002 312 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 SIX3O95343 332 aaPredicted RBP9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 IFNA16P05015 189 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 INHBAP08476 426 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 CPN2P22792 545 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 MEOX1P50221 254 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 RAP1GDS1P52306 607 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 CASP6P55212 293 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 PHEXP78562 749 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 TNFRSF17Q02223 184 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 DDX39BQ13838 428 aaKnown RBP9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 GTF2H2Q13888 395 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 GLE1Q53GS7 698 aaKnown RBP9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 OR4C11Q6IEV9 310 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 GTF2H2CQ6P1K8 395 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 RPTNQ6XPR3 784 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 HSDL2Q6YN16 418 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 MDGA2Q7Z553 956 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 MYLK4Q86YV6 388 aaPredicted RBP9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 SPPL2CQ8IUH8 684 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 SULF2Q8IWU5 870 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 SLC34A3Q8N130 599 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 PLD6Q8N2A8 252 aaKnown RBP9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 GHDCQ8N2G8 530 aa9.72□□□□□ -0.85
HMGXB3-205ENST00000514469 ZNF808Q8N4W9 903 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms