RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 GBP5Q96PP8 586 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 OR1F2PQ96R84 312 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 ZBTB18Q99592 522 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 TMEM120AQ9BXJ8 343 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 TRPC4Q9UBN4 977 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 ZNF282Q9UDV7 671 aaPredicted RBP9.6□□□□□ -0.87
NEDD9-214ENST00000513989 NXT1Q9UKK6 140 aaKnown RBP9.6□□□□□ -0.87
NEDD9-214ENST00000513989 DAPP1Q9UN19 280 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 TMEM184BQ9Y519 407 aaPredicted RBP9.6□□□□□ -0.87
NEDD9-214ENST00000513989 MAU2Q9Y6X3 613 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 SDK2Q58EX2 2172 aa9.6□□□□□ -0.87
NEDD9-214ENST00000513989 A0A0A6YYD5 115 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 SYNDIG1LA6NDD5 238 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 CDRT15L2A8MXV6 281 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 RRP8O43159 456 aaKnown RBP9.59□□□□□ -0.87
NEDD9-214ENST00000513989 PROM1O43490 865 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 RDH16O75452 317 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 EEDO75530 441 aaKnown RBP9.59□□□□□ -0.87
NEDD9-214ENST00000513989 TIAF1O95411 115 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 FAM107AO95990 144 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 GBAP04062 536 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 JUNP05412 331 aaKnown RBP9.59□□□□□ -0.87
NEDD9-214ENST00000513989 BCKDHAP12694 445 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 ZNF28P17035 718 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 NCF2P19878 526 aaPredicted RBP9.59□□□□□ -0.87
NEDD9-214ENST00000513989 PRPS1L1P21108 318 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 CERS1P27544 350 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 RORAP35398 523 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 GCGRP47871 477 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 LIM2P55344 173 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 RAB38P57729 211 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 TAS2R50P59544 299 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 ZNF763Q0D2J5 394 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 C2orf80Q0P641 193 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 ZNF793Q6ZN11 406 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 IKBIPQ70UQ0 350 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 MAVSQ7Z434 540 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 R3HCC1LQ7Z5L2 792 aaKnown RBP9.59□□□□□ -0.87
NEDD9-214ENST00000513989 PDSS2Q86YH6 399 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 SAMD14Q8IZD0 417 aaPredicted RBP9.59□□□□□ -0.87
NEDD9-214ENST00000513989 METTL27Q8N6F8 245 aaPredicted RBP9.59□□□□□ -0.87
NEDD9-214ENST00000513989 EFCAB3Q8N7B9 438 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 SLC38A9Q8NBW4 561 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 C16orf78Q8WTQ4 265 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 TANKQ92844 425 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 FKBP10Q96AY3 582 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 MIEF2Q96C03 454 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 NAF1Q96HR8 494 aaKnown RBP9.59□□□□□ -0.87
NEDD9-214ENST00000513989 OR52B2Q96RD2 323 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 EFHD1Q9BUP0 239 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 SORBS1Q9BX66 1292 aaKnown RBP9.59□□□□□ -0.87
NEDD9-214ENST00000513989 GPR87Q9BY21 358 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 DPY30Q9C005 99 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 TGIF2Q9GZN2 237 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 AICDAQ9GZX7 198 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 KCNK13Q9HB14 408 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 CPNE5Q9HCH3 593 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 LHX9Q9NQ69 397 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 PRDM9Q9NQV7 894 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 TMEM45AQ9NWC5 275 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 ASIC5Q9NY37 505 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 FBXW2Q9UKT8 454 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 PADI2Q9Y2J8 665 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 ARL2BPQ9Y2Y0 163 aa9.59□□□□□ -0.87
NEDD9-214ENST00000513989 MRPS2Q9Y399 296 aaKnown RBP9.59□□□□□ -0.87
NEDD9-214ENST00000513989 POLR3HQ9Y535 204 aaPredicted RBP9.59□□□□□ -0.87
NEDD9-214ENST00000513989 C1orf226A1L170 272 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 ZNF860A6NHJ4 632 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 C21orf140B9A014 251 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 E9PBE3 544 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 NDUFAB1O14561 156 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 SNX3O60493 162 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 KLHL41O60662 606 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 RAD1O60671 282 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 PRMT3O60678 531 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 FHP07954 510 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 RAB40ALP0C0E4 278 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 PRR35P0CG20 571 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 TCN2P20062 427 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 TPP2P29144 1249 aaPredicted RBP9.58□□□□□ -0.88
NEDD9-214ENST00000513989 HPCAL1P37235 193 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 XCR1P46094 333 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 CLNS1AP54105 237 aaKnown RBP9.58□□□□□ -0.88
NEDD9-214ENST00000513989 PCBP4P57723 403 aaKnown RBP9.58□□□□□ -0.88
NEDD9-214ENST00000513989 CXADRP78310 365 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 RAE1P78406 368 aaKnown RBP9.58□□□□□ -0.88
NEDD9-214ENST00000513989 ACTN3Q08043 901 aaPredicted RBP9.58□□□□□ -0.88
NEDD9-214ENST00000513989 SF3A3Q12874 501 aaKnown RBP eCLIP9.58□□□□□ -0.88
NEDD9-214ENST00000513989 RUNX2Q13950 521 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 MRM1Q6IN84 353 aaKnown RBP9.58□□□□□ -0.88
NEDD9-214ENST00000513989 PRSS41Q7RTY9 318 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 GPR155Q7Z3F1 870 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 PIGWQ7Z7B1 504 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 ZNF595Q8IYB9 648 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 CACNA2D3Q8IZS8 1091 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 CA13Q8N1Q1 262 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 MIER2Q8N344 545 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 ZNF843Q8N446 348 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 LIX1Q8N485 282 aa9.58□□□□□ -0.88
NEDD9-214ENST00000513989 NATD1Q8N6N6 113 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms