RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 CHEK2O96017 543 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 ALBP02768 609 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 HEXBP07686 556 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 RNH1P13489 461 aaKnown RBP9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 HSD3B1P14060 373 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 MAOAP21397 527 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 ZNF10P21506 573 aaPredicted RBP9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 CPN2P22792 545 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 HSD3B2P26439 372 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 PPP2R1BP30154 601 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 EMP2P54851 167 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 TMPRSS3P57727 454 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 SKP1P63208 163 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 BTG2P78543 158 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 OCRLQ01968 901 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 CDC20Q12834 499 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 ATP1A4Q13733 1029 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 COL28A1Q2UY09 1125 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 GALNTL6Q49A17 601 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 CCNYL2Q5T2Q4 361 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 VWA5B1Q5TIE3 1220 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 CPZQ66K79 652 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 ATG16L1Q676U5 607 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 CYP20A1Q6UW02 462 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 Q6ZSR9 355 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 MRGPREQ86SM8 312 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 TRIM42Q8IWZ5 723 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 SRFBP1Q8NEF9 429 aaKnown RBP9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 CLHC1Q8NHS4 586 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 C19orf60Q96EN9 201 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 GPR87Q9BY21 358 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 NUF2Q9BZD4 464 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 ILKAPQ9H0C8 392 aaPredicted RBP9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 DDX31Q9H8H2 851 aaKnown RBP9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 WDR54Q9H977 334 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 C14orf105Q9NVL8 296 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 KCMF1Q9P0J7 381 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 C5AR2Q9P296 337 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 PPT2Q9UMR5 302 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 ATG4BQ9Y4P1 393 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 PCDHGA6Q9Y5G7 932 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 HS3ST3B1Q9Y662 390 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 NBEAQ8NFP9 2946 aa9.23□□□□□ -0.93
TOPBP1-209ENST00000513818 GNG14A0A1W2PPG7 69 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 A0A1W2PR48 441 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 A0A1W2PS29 197 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 SLC28A1O00337 649 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 ICMTO60725 284 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 LDB3O75112 727 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 PEX11AO75192 247 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 RSL1D1O76021 490 aaKnown RBP9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 FGF4P08620 206 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 FAM58BPP0C7Q3 252 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 TIA1P31483 386 aaKnown RBP eCLIP9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 PTGER1P34995 402 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 RPL14P50914 215 aaKnown RBP9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 MAPK12P53778 367 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 RHAGQ02094 409 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 GUCY1A3Q02108 690 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 TNFRSF17Q02223 184 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 ACSM2AQ08AH3 577 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 SF3A3Q12874 501 aaKnown RBP eCLIP9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 DEFB109BQ30KR1 87 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 XKR7Q5GH72 579 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 C10orf62Q5T681 223 aaPredicted RBP9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 ACSM2BQ68CK6 577 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 MRM1Q6IN84 353 aaKnown RBP9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 FAM180BQ6P0A1 224 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 MAVSQ7Z434 540 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 TRIM46Q7Z4K8 759 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 OR4N5Q8IXE1 308 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 ZCCHC7Q8N3Z6 543 aaKnown RBP9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 GBP7Q8N8V2 638 aaPredicted RBP9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 RAB3IL1Q8TBN0 382 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 ADAMTS17Q8TE56 1095 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 DOK4Q8TEW6 326 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 CHTF18Q8WVB6 975 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 CKAP2Q8WWK9 683 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 ZDHHC16Q969W1 377 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 THOC1Q96FV9 657 aaKnown RBP9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 C1orf50Q9BV19 199 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 NPLQ9BXD5 320 aaPredicted RBP9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 TGIF2Q9GZN2 237 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 ROGDIQ9GZN7 287 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 LRTM1Q9HBL6 345 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 NECTIN3Q9NQS3 549 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 PRTFDC1Q9NRG1 225 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 THAP1Q9NVV9 213 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 AHSPQ9NZD4 102 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 NXT1Q9UKK6 140 aaKnown RBP9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 DLGAP4Q9Y2H0 992 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 ASB4Q9Y574 426 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 PTPRQQ9UMZ3 2332 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 ATMQ13315 3056 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 PKD1L2Q7Z442 2459 aa9.22□□□□□ -0.93
TOPBP1-209ENST00000513818 GOLGA8QA0A0J9YX86 632 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 SERTM1A2A2V5 107 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 GOLGA8OA6NCC3 632 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 ARGFXA6NJG6 315 aa9.21□□□□□ -0.94
TOPBP1-209ENST00000513818 A8MUA0 341 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms