RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 C11orf16Q9NQ32 467 aa11.04□□□□□ -0.64
SNX25-205ENST00000512853 DDX28Q9NUL7 540 aaKnown RBP11.04□□□□□ -0.64
SNX25-205ENST00000512853 MGAT4BQ9UQ53 548 aa11.04□□□□□ -0.64
SNX25-205ENST00000512853 CMAHPQ9Y471 501 aa11.04□□□□□ -0.64
SNX25-205ENST00000512853 DNAH12Q6ZR08 3092 aa11.04□□□□□ -0.64
SNX25-205ENST00000512853 TRBV4-1A0A0J9YWV2 114 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 A0A1W2PQ09 198 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 A6NL46 340 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 H3BM21 787 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 FFAR1O14842 300 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 MFN2O95140 757 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 SLC16A8O95907 504 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 SLC10A3P09131 477 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 VIPR1P32241 457 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 CHI3L1P36222 383 aaPredicted RBP11.03□□□□□ -0.64
SNX25-205ENST00000512853 DSTNP60981 165 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 ZNF91Q05481 1191 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 LARS2Q15031 903 aaKnown RBP11.03□□□□□ -0.64
SNX25-205ENST00000512853 BAK1Q16611 211 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 PRSS53Q2L4Q9 553 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 GLYR1Q49A26 553 aaPredicted RBP11.03□□□□□ -0.64
SNX25-205ENST00000512853 ZMAT1Q5H9K5 638 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 TXNDC8Q6A555 127 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 KIAA1841Q6NSI8 718 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 UNC5DQ6UXZ4 953 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 DPY19L3Q6ZPD9 716 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 VASH1Q7L8A9 365 aaPredicted RBP11.03□□□□□ -0.64
SNX25-205ENST00000512853 NANOGNBQ7Z5D8 188 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 TMPRSS11BQ86T26 416 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 TRAM1L1Q8N609 369 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 NANOGP1Q8N7R0 232 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 FBXO15Q8NCQ5 510 aaPredicted RBP11.03□□□□□ -0.64
SNX25-205ENST00000512853 PROKR2Q8NFJ6 384 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 BTN2A2Q8WVV5 523 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 NEIL2Q969S2 332 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 MSLNLQ96KJ4 702 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 EFCAB11Q9BUY7 163 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 CLEC2DQ9UHP7 191 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 RAB23Q9ULC3 237 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 MAP4K5Q9Y4K4 846 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 KCNE2Q9Y6J6 123 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 TET1Q8NFU7 2136 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.03□□□□□ -0.64
SNX25-205ENST00000512853 MEIOCA2RUB1 952 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 CENPXA8MT69 81 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 WASH3PC4AMC7 463 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 CACNB4O00305 520 aaPredicted RBP11.03□□□□□ -0.64
SNX25-205ENST00000512853 TSPAN6O43657 245 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 IL1AP01583 271 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 CYP2A6P11509 494 aaPredicted RBP11.03□□□□□ -0.64
SNX25-205ENST00000512853 ELNP15502 786 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 PSMA1P25786 263 aaKnown RBP11.03□□□□□ -0.64
SNX25-205ENST00000512853 PRLHRP49683 370 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 EPHB3P54753 998 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 LIM2P55344 173 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 MRPS15P82914 257 aaKnown RBP11.03□□□□□ -0.64
SNX25-205ENST00000512853 MC1RQ01726 317 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 RUNX1T1Q06455 604 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 C2orf80Q0P641 193 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 HYAL2Q12891 473 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 SLBPQ14493 270 aaKnown RBP eCLIP11.03□□□□□ -0.64
SNX25-205ENST00000512853 PUM1Q14671 1186 aaKnown RBP eCLIP11.03□□□□□ -0.64
SNX25-205ENST00000512853 OCLNQ16625 522 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 TBRG1Q3YBR2 411 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 LRRC73Q5JTD7 316 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 ZNF648Q5T619 568 aaPredicted RBP11.03□□□□□ -0.64
SNX25-205ENST00000512853 HENMT1Q5T8I9 393 aaKnown RBP11.03□□□□□ -0.64
SNX25-205ENST00000512853 MFSD4BQ5TF39 518 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 IKBIPQ70UQ0 350 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 HSD11B1LQ7Z5J1 315 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 GALNT12Q8IXK2 581 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 RDH10Q8IZV5 341 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 OR5AK3PQ8NH89 298 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 VANGL1Q8TAA9 524 aaPredicted RBP11.03□□□□□ -0.64
SNX25-205ENST00000512853 WDR48Q8TAF3 677 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 SLC7A6Q92536 515 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 FOXJ1Q92949 421 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 SCAMP4Q969E2 229 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 TMEM159Q96B96 161 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 PDXPQ96GD0 296 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 IGSF21Q96ID5 467 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 TMEM121BQ9BXQ6 578 aaPredicted RBP11.03□□□□□ -0.64
SNX25-205ENST00000512853 NDEL1Q9GZM8 345 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 MCOLN1Q9GZU1 580 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 SLC22A4Q9H015 551 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 TMEM245Q9H330 911 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 A4GALTQ9NPC4 353 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 DNAJC27Q9NZQ0 273 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 CFAP97Q9P2B7 532 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 GULP1Q9UBP9 304 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 SSR3Q9UNL2 185 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 RPL36Q9Y3U8 105 aaKnown RBP11.03□□□□□ -0.64
SNX25-205ENST00000512853 INSL5Q9Y5Q6 135 aa11.03□□□□□ -0.64
SNX25-205ENST00000512853 A0A1W2PQ45 241 aaPredicted RBP11.02□□□□□ -0.65
SNX25-205ENST00000512853 A0A1W2PQY0 241 aa11.02□□□□□ -0.65
SNX25-205ENST00000512853 A0A1W2PRB8 838 aa11.02□□□□□ -0.65
SNX25-205ENST00000512853 OR2AG2A6NM03 316 aa11.02□□□□□ -0.65
SNX25-205ENST00000512853 FAM227AF5H4B4 570 aa11.02□□□□□ -0.65
SNX25-205ENST00000512853 FAAHO00519 579 aa11.02□□□□□ -0.65
SNX25-205ENST00000512853 RGS5O15539 181 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms