RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 FAM221AA4D161 298 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 TMEM200CA6NKL6 621 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 FAM159BA6NKW6 160 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 FIGNL2A6NMB9 653 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 CYR61O00622 381 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 EIF3HO15372 352 aaKnown RBP eCLIP11.67□□□□□ -0.54
VEGFA-216ENST00000512683 ERI3O43414 337 aaKnown RBP11.67□□□□□ -0.54
VEGFA-216ENST00000512683 SUSD5O60279 629 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 GLSO94925 669 aaPredicted RBP11.67□□□□□ -0.54
VEGFA-216ENST00000512683 GDF5P43026 501 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 GPX6P59796 221 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 POU4F1Q01851 419 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 PLGLB1Q02325 96 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 PMPCAQ10713 525 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 STX4Q12846 297 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 CALCOCO2Q13137 446 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 TSNQ15631 228 aaKnown RBP11.67□□□□□ -0.54
VEGFA-216ENST00000512683 HIST2H2ACQ16777 129 aaPredicted RBP11.67□□□□□ -0.54
VEGFA-216ENST00000512683 MPEG1Q2M385 716 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 PAGE2BQ5JRK9 111 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 HIST2H2AA3Q6FI13 130 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 ABHD17CQ6PCB6 329 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 SYT10Q6XYQ8 523 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 FRA10AC1Q70Z53 315 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 DND1Q8IYX4 353 aaKnown RBP11.67□□□□□ -0.54
VEGFA-216ENST00000512683 MARVELD2Q8N4S9 558 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 SLC15A4Q8N697 577 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 OR2M7Q8NG81 312 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 UBE2E3Q969T4 207 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 WDR34Q96EX3 536 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 ZNF559Q9BR84 538 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 EFCAB11Q9BUY7 163 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 DERL2Q9GZP9 239 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 AICDAQ9GZX7 198 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 KCMF1Q9P0J7 381 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 ZNF223Q9UK11 482 aaPredicted RBP11.67□□□□□ -0.54
VEGFA-216ENST00000512683 SPACA6W5XKT8 324 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 NCOA6Q14686 2063 aaPredicted RBP11.67□□□□□ -0.54
VEGFA-216ENST00000512683 SPG11Q96JI7 2443 aa11.67□□□□□ -0.54
VEGFA-216ENST00000512683 C4orf51C9J302 202 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 CLGNO14967 610 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 TAPBPO15533 448 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 KLK8O60259 260 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 HCN1O60741 890 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 WDR1O75083 606 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 OR2J2O76002 312 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 WDR47O94967 919 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 IFNA16P05015 189 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 GABRA1P14867 456 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 ACVR2AP27037 513 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 SERPINB1P30740 379 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 CASQ1P31415 396 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 CASP2P42575 452 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 KCNC1P48547 511 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 LIM2P55344 173 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 SLBPQ14493 270 aaKnown RBP eCLIP11.66□□□□□ -0.54
VEGFA-216ENST00000512683 SLC10A1Q14973 349 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 TGFBIQ15582 683 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 TBCCQ15814 346 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 TMEM35AQ53FP2 167 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 XKR6Q5GH73 641 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 EMC4Q5J8M3 183 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 SULT1C3Q6IMI6 304 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 ZDHHC24Q6UX98 284 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 IL20RBQ6UXL0 311 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 C3orf62Q6ZUJ4 267 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 NCCRP1Q6ZVX7 275 aaPredicted RBP11.66□□□□□ -0.54
VEGFA-216ENST00000512683 ZNF572Q7Z3I7 529 aaPredicted RBP11.66□□□□□ -0.54
VEGFA-216ENST00000512683 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.66□□□□□ -0.542e-6■■■■■ 55.7
VEGFA-216ENST00000512683 FAM109AQ8N4B1 249 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 SPATA6LQ8N4H0 392 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 PTPMT1Q8WUK0 201 aaPredicted RBP11.66□□□□□ -0.54
VEGFA-216ENST00000512683 NINJ1Q92982 152 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 SARAFQ96BY9 339 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 PTCD3Q96EY7 689 aaKnown RBP11.66□□□□□ -0.54
VEGFA-216ENST00000512683 KCNC2Q96PR1 638 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 RASL10BQ96S79 203 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 GPR22Q99680 433 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 RBBP8Q99708 897 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 CPNE1Q99829 537 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 TBCDQ9BTW9 1192 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 ALOXE3Q9BYJ1 711 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 DEFB127Q9H1M4 99 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 NPDC1Q9NQX5 325 aaPredicted RBP11.66□□□□□ -0.54
VEGFA-216ENST00000512683 DNAJC11Q9NVH1 559 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 ADGRG4Q8IZF6 3080 aa11.66□□□□□ -0.54
VEGFA-216ENST00000512683 NPIPA2E9PIF3 369 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 NPIPA3F8WFD2 350 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 AQP7O14520 342 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 PHGDHO43175 533 aaKnown RBP11.65□□□□□ -0.54
VEGFA-216ENST00000512683 DYRK3O43781 588 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 STK16O75716 305 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 PDE9AO76083 593 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 OR6B1O95007 311 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 CCDC166P0CW27 439 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 TNNI3P19429 210 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 HNRNPH1P31943 449 aaKnown RBP11.65□□□□□ -0.54
VEGFA-216ENST00000512683 GMPRP36959 345 aa11.65□□□□□ -0.54
VEGFA-216ENST00000512683 ZFP36L2P47974 494 aaKnown RBP11.65□□□□□ -0.54
VEGFA-216ENST00000512683 PLA2G16P53816 162 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms