RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 DNALI1O14645 258 aaPredicted RBP6.72□□□□□ -1.33
USP46-208ENST00000512656 PRRG2O14669 202 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 ASNA1O43681 348 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 NME2P1O60361 137 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 B4GALT2O60909 372 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 H2AFYO75367 372 aaKnown RBP6.72□□□□□ -1.33
USP46-208ENST00000512656 SLC25A12O75746 678 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 NEURL1O76050 574 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 CLDN14O95500 239 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 GUCA1CO95843 209 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 TSPAN12O95859 305 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 ZNF888P0CJ79 500 aaPredicted RBP6.72□□□□□ -1.33
USP46-208ENST00000512656 GABRB3P28472 473 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 SSTR2P30874 369 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 HPDP32754 393 aaPredicted RBP6.72□□□□□ -1.33
USP46-208ENST00000512656 STXBP1P61764 594 aaKnown RBP6.72□□□□□ -1.33
USP46-208ENST00000512656 CCZ1BP86790 482 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 CCZ1P86791 482 aaPredicted RBP6.72□□□□□ -1.33
USP46-208ENST00000512656 TIAL1Q01085 375 aaKnown RBP eCLIP6.72□□□□□ -1.33
USP46-208ENST00000512656 C3AR1Q16581 482 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 MAPKAPK3Q16644 382 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 KCTD19Q17RG1 926 aaPredicted RBP6.72□□□□□ -1.33
USP46-208ENST00000512656 BBS9Q3SYG4 887 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 FBLN7Q53RD9 439 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 RBM20Q5T481 1227 aaKnown RBP6.72□□□□□ -1.33
USP46-208ENST00000512656 TEDDM1Q5T9Z0 273 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 HECTD2Q5U5R9 776 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.72□□□□□ -1.33
USP46-208ENST00000512656 CDH24Q86UP0 819 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 NKAPQ8N5F7 415 aaKnown RBP6.72□□□□□ -1.33
USP46-208ENST00000512656 TTLQ8NG68 377 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 OR5T3Q8NGG3 340 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 ELP5Q8TE02 316 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 ANKRD7Q92527 254 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 NEIL2Q969S2 332 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 PYCR2Q96C36 320 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 LRRC39Q96DD0 335 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 MTFMTQ96DP5 389 aaKnown RBP6.72□□□□□ -1.33
USP46-208ENST00000512656 VPS39Q96JC1 886 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 FAR2Q96K12 515 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 OSBPL9Q96SU4 736 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 NPAS2Q99743 824 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 KRTAP4-7Q9BYR0 210 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 DEFB126Q9BYW3 111 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 PELI2Q9HAT8 420 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 TINAGQ9UJW2 476 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 NPIPA1Q9UND3 350 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 KLF13Q9Y2Y9 288 aaPredicted RBP6.72□□□□□ -1.33
USP46-208ENST00000512656 MEMO1Q9Y316 297 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 MMACHCQ9Y4U1 282 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 KCNE2Q9Y6J6 123 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 SPG11Q96JI7 2443 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 CPAMD8Q8IZJ3 1885 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 NF1P21359 2839 aa6.72□□□□□ -1.33
USP46-208ENST00000512656 A0A088AWK7 358 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 SAGE2PA6NJ88 616 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 E9PLN8 166 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 KLRC4-KLRK1H3BQV0 150 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 CLDN4O14493 209 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 TFECO14948 347 aaPredicted RBP6.71□□□□□ -1.34
USP46-208ENST00000512656 ZSCAN12O43309 604 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 SERPINA6P08185 405 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 RAC2P15153 192 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 ZNF10P21506 573 aaPredicted RBP6.71□□□□□ -1.34
USP46-208ENST00000512656 GSTM2P28161 218 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 TPP2P29144 1249 aaPredicted RBP6.71□□□□□ -1.34
USP46-208ENST00000512656 TRHRP34981 398 aaPredicted RBP6.71□□□□□ -1.34
USP46-208ENST00000512656 HNMTP50135 292 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 HLCSP50747 726 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 MLF1P58340 268 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 RAB8AP61006 207 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 OLR1P78380 273 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 ADORA2A-AS1P86434 159 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 REEP5Q00765 189 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 RCN2Q14257 317 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 MORF4L2Q15014 288 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 RBBP5Q15291 538 aaKnown RBP6.71□□□□□ -1.34
USP46-208ENST00000512656 TERF2Q15554 542 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 CATSPEREQ5SY80 951 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 SYDE1Q6ZW31 735 aaPredicted RBP6.71□□□□□ -1.34
USP46-208ENST00000512656 FRA10AC1Q70Z53 315 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 THOC6Q86W42 341 aaKnown RBP6.71□□□□□ -1.34
USP46-208ENST00000512656 SIAH3Q8IW03 269 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 ADAMTS18Q8TE60 1221 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 UTP15Q8TED0 518 aaKnown RBP6.71□□□□□ -1.34
USP46-208ENST00000512656 AGAP11Q8TF27 550 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 PHF10Q8WUB8 498 aaKnown RBP6.71□□□□□ -1.34
USP46-208ENST00000512656 CHTF18Q8WVB6 975 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 SLCO2A1Q92959 643 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 CFAP36Q96G28 342 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 SEC16BQ96JE7 1060 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 LURAP1Q96LR2 239 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 TSNARE1Q96NA8 513 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 RUNDC3BQ96NL0 473 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 OR4K3Q96R72 315 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 EGFL8Q99944 293 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 VKORC1Q9BQB6 163 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 CCDC77Q9BR77 488 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 TRIM51Q9BSJ1 452 aa6.71□□□□□ -1.34
USP46-208ENST00000512656 NPLQ9BXD5 320 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms