RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 CLDN16Q9Y5I7 305 aa7.01□□□□□ -1.29
DEPDC1B-205ENST00000512078 PLCE1Q9P212 2302 aa7.01□□□□□ -1.29
DEPDC1B-205ENST00000512078 A0A0A6YYJ9 748 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 CCDC162PA2VCL2 907 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 LRRC53A6NM62 1247 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 LGALS16A8MUM7 142 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 SLCO1B7G3V0H7 640 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 TGFBR3LH3BV60 316 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 SSX4O60224 188 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 KIAA0513O60268 411 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 AVILO75366 819 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 SMNDC1O75940 238 aaKnown RBP eCLIP7□□□□□ -1.29
DEPDC1B-205ENST00000512078 CRHP06850 196 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 RNH1P13489 461 aaKnown RBP7□□□□□ -1.29
DEPDC1B-205ENST00000512078 ALOX12P18054 663 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 PPP2R1BP30154 601 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 COILP38432 576 aaPredicted RBP7□□□□□ -1.29
DEPDC1B-205ENST00000512078 NRF1Q16656 503 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 ZNF791Q3KP31 576 aaPredicted RBP7□□□□□ -1.29
DEPDC1B-205ENST00000512078 E4F1Q66K89 784 aaPredicted RBP7□□□□□ -1.29
DEPDC1B-205ENST00000512078 CAPN13Q6MZZ7 669 aaPredicted RBP7□□□□□ -1.29
DEPDC1B-205ENST00000512078 CLEC2AQ6UVW9 174 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 CLEC17AQ6ZS10 378 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 SCUBE1Q8IWY4 988 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 LRRC56Q8IYG6 542 aaPredicted RBP7□□□□□ -1.29
DEPDC1B-205ENST00000512078 ZNF480Q8WV37 535 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 ABTB1Q969K4 478 aaPredicted RBP7□□□□□ -1.29
DEPDC1B-205ENST00000512078 FBXW5Q969U6 566 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 STARD4Q96DR4 205 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 PLPPR2Q96GM1 343 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 MRFAP1L1Q96HT8 127 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 ZNF597Q96LX8 424 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 JSRP1Q96MG2 331 aaPredicted RBP7□□□□□ -1.29
DEPDC1B-205ENST00000512078 QKIQ96PU8 341 aaKnown RBP eCLIP7□□□□□ -1.296e-6■□□□□ 8.8
DEPDC1B-205ENST00000512078 PANX3Q96QZ0 392 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 SLC39A3Q9BRY0 314 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 ADAP2Q9NPF8 381 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 AIPL1Q9NZN9 384 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 CNIH4Q9P003 139 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 INTUQ9ULD6 942 aa7□□□□□ -1.29
DEPDC1B-205ENST00000512078 PSMD12O00232 456 aaPredicted RBP6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 DLX3O60479 287 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 TRIM3O75382 744 aaPredicted RBP6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 TRAPPC6AO75865 159 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 VENTXO95231 258 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 B3GALT4O96024 378 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 SERPINC1P01008 464 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 CPN1P15169 458 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 CHMP24386 653 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 PSMB4P28070 264 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 RNF4P78317 190 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 PRPSAP1Q14558 356 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 ELAVL1Q15717 326 aaKnown RBP6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 PHKG1Q16816 387 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 MPEG1Q2M385 716 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 VWA1Q6PCB0 445 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 LYPD8Q6UX82 237 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 SEZ6L2Q6UXD5 910 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 TMEM132CQ8N3T6 1108 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 OR5L2Q8NGL0 311 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 LILRB1Q8NHL6 650 aaPredicted RBP6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 SMAP2Q8WU79 429 aaPredicted RBP6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 SREK1Q8WXA9 508 aaKnown RBP6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 GCDHQ92947 438 aaPredicted RBP6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 REPS1Q96D71 796 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 PKP4Q99569 1192 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 FERMT1Q9BQL6 677 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 DOHHQ9BU89 302 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 GRIP2Q9C0E4 1043 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 MAPRE3Q9UPY8 281 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 LOC100289279A0A1B0GTE1 492 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 SYNDIG1LA6NDD5 238 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 MROH6A6NGR9 719 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 HACD1B0YJ81 288 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 H0Y3Z8 333 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 GFYI3L273 518 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 EIF3FO00303 357 aaPredicted RBP6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 PRMT5O14744 637 aaPredicted RBP6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 LCMT2O60294 686 aaKnown RBP6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 CEP104O60308 925 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 PSIP1O75475 530 aaKnown RBP6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 ACSL3O95573 720 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 SLC16A8O95907 504 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 ACTL6AO96019 429 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 KRT1P04264 644 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 PPP3CBP16298 524 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 ATP5DP30049 168 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 RBMXP38159 391 aaKnown RBP6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 NUDT6P53370 316 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 LSM11P83369 360 aaKnown RBP eCLIP6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 UBXN1Q04323 297 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 KLHL30Q0D2K2 578 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 BMPR2Q13873 1038 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 GBX1Q14549 363 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 SEMA3AQ14563 771 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 POU6F1Q14863 301 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 GLIPR1L2Q4G1C9 344 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 PIGGQ5H8A4 983 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 TBCELQ5QJ74 424 aa6.99□□□□□ -1.29
DEPDC1B-205ENST00000512078 THEMIS2Q5TEJ8 643 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms