RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 SEC14L3Q9UDX4 400 aa10.44□□□□□ -0.74
CPNE4-209ENST00000512055 MAGED1Q9Y5V3 778 aaPredicted RBP10.44□□□□□ -0.74
CPNE4-209ENST00000512055 LOC730098B7Z3J9 87 aa10.44□□□□□ -0.74
CPNE4-209ENST00000512055 EI24O14681 340 aa10.44□□□□□ -0.74
CPNE4-209ENST00000512055 GJB3O75712 270 aa10.44□□□□□ -0.74
CPNE4-209ENST00000512055 IFNA1P01562 189 aa10.44□□□□□ -0.74
CPNE4-209ENST00000512055 PCCBP05166 539 aa10.44□□□□□ -0.74
CPNE4-209ENST00000512055 CD72P21854 359 aa10.44□□□□□ -0.74
CPNE4-209ENST00000512055 DNAJB1P25685 340 aa10.44□□□□□ -0.74
CPNE4-209ENST00000512055 TLX1P31314 330 aaPredicted RBP10.44□□□□□ -0.74
CPNE4-209ENST00000512055 CDH12P55289 794 aa10.44□□□□□ -0.74
CPNE4-209ENST00000512055 RHDQ02161 417 aa10.44□□□□□ -0.74
CPNE4-209ENST00000512055 GALEQ14376 348 aa10.44□□□□□ -0.74
CPNE4-209ENST00000512055 GRB7Q14451 532 aa10.44□□□□□ -0.74
CPNE4-209ENST00000512055 SFT2D3Q587I9 215 aa10.44□□□□□ -0.74
CPNE4-209ENST00000512055 GOLGA7Q7Z5G4 137 aa10.44□□□□□ -0.74
CPNE4-209ENST00000512055 TSPAN33Q86UF1 283 aa10.44□□□□□ -0.74
CPNE4-209ENST00000512055 C7orf61Q8IZ16 206 aa10.44□□□□□ -0.74
CPNE4-209ENST00000512055 ZNF808Q8N4W9 903 aaPredicted RBP10.44□□□□□ -0.74
CPNE4-209ENST00000512055 NEDD4LQ96PU5 975 aa10.44□□□□□ -0.74
CPNE4-209ENST00000512055 LGR4Q9BXB1 951 aa10.44□□□□□ -0.74
CPNE4-209ENST00000512055 OR2AG1Q9H205 316 aa10.44□□□□□ -0.74
CPNE4-209ENST00000512055 SMURF1Q9HCE7 757 aa10.44□□□□□ -0.74
CPNE4-209ENST00000512055 TAS2R10Q9NYW0 307 aa10.44□□□□□ -0.74
CPNE4-209ENST00000512055 KCNS2Q9ULS6 477 aa10.44□□□□□ -0.74
CPNE4-209ENST00000512055 SLC22A14Q9Y267 594 aa10.44□□□□□ -0.74
CPNE4-209ENST00000512055 USP3Q9Y6I4 520 aa10.44□□□□□ -0.74
CPNE4-209ENST00000512055 KIAA0100Q14667 2235 aaKnown RBP10.43□□□□□ -0.74
CPNE4-209ENST00000512055 LEFTY2O00292 366 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 ITPKBP27987 946 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 CTHP32929 405 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 CASP9P55211 416 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 UNC50Q53HI1 259 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 ENDOVQ8N8Q3 282 aaKnown RBP10.43□□□□□ -0.74
CPNE4-209ENST00000512055 BOLLQ8N9W6 283 aaKnown RBP10.43□□□□□ -0.74
CPNE4-209ENST00000512055 FNDC8Q8TC99 324 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 C5orf34Q96MH7 638 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 FAIM2Q9BWQ8 316 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 SPATA9Q9BWV2 254 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 UNKLQ9H9P5 680 aaKnown RBP10.43□□□□□ -0.74
CPNE4-209ENST00000512055 TDP1Q9NUW8 608 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 OSER1Q9NX31 292 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 CD300AQ9UGN4 299 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 TESMINQ9Y4I5 508 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 COL4A5P29400 1685 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 LY75O60449 1722 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 TBC1D3DA0A087WVF3 549 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 TBC1D3IA0A087WXS9 549 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 TBC1D3EA0A087X179 549 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 TBC1D3KA0A087X1G2 549 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 TBC1D3FA6NER0 549 aaPredicted RBP10.43□□□□□ -0.74
CPNE4-209ENST00000512055 TBC1D3LB9A6J9 549 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 hCG_2039718K7EN88 272 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 RNASEH2AO75792 299 aaKnown RBP10.43□□□□□ -0.74
CPNE4-209ENST00000512055 ARHGEF15O94989 841 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 NFATC1O95644 943 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 GPIP06744 558 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 C8GP07360 202 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 TBC1D3HP0C7X1 549 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 G6PDP11413 515 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 TYRP14679 529 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 SYN1P17600 705 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 CXCR2P25025 360 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 CERS1P27544 350 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 CDKN1CP49918 316 aaPredicted RBP10.43□□□□□ -0.74
CPNE4-209ENST00000512055 BIDP55957 195 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 PPP1R8Q12972 351 aaKnown RBP10.43□□□□□ -0.74
CPNE4-209ENST00000512055 TBC1D3GQ6DHY5 549 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 TBC1D3CQ6IPX1 549 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 ZNF767PQ75MW2 155 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 MOB1BQ7L9L4 216 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 C17orf64Q86WR6 236 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 TBC1D3Q8IZP1 549 aaPredicted RBP10.43□□□□□ -0.74
CPNE4-209ENST00000512055 SLC5A11Q8WWX8 675 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 KATNBL1Q9H079 304 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 C14orf119Q9NWQ9 140 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 TRBV23OR9-2A0A075B6M9 112 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 DAPL1A0PJW8 107 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 ELOA3DA6NLF2 546 aaPredicted RBP10.43□□□□□ -0.74
CPNE4-209ENST00000512055 ADAMTS4O75173 837 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 SORBS2O94875 1100 aaKnown RBP10.43□□□□□ -0.74
CPNE4-209ENST00000512055 SLC7A1P30825 629 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 CAMLGP49069 296 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 PPIGQ13427 754 aaKnown RBP eCLIP10.43□□□□□ -0.74
CPNE4-209ENST00000512055 ELOA3BQ3SY89 546 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 LY6G5CQ5SRR4 150 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 ZFP82Q8N141 532 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 ZNF439Q8NDP4 499 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 ELOA3Q8NG57 546 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 KCNJ9Q92806 393 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 KLK6Q92876 244 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 SMIM14Q96QK8 99 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 C1QTNF7Q9BXJ2 289 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 UCK2Q9BZX2 261 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 SPO11Q9Y5K1 396 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 C2orf92A0A1B0GVN3 265 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 ATP6V1G2-DDX39BF2Z307 99 aa10.43□□□□□ -0.74
CPNE4-209ENST00000512055 SAP18O00422 153 aaKnown RBP10.43□□□□□ -0.74
CPNE4-209ENST00000512055 ZNF182P17025 639 aaPredicted RBP10.43□□□□□ -0.74
CPNE4-209ENST00000512055 HOXB6P17509 224 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms