RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 CDYL2Q8N8U2 506 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 ANKRD42Q8N9B4 389 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 Q8NA96 180 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 TTLQ8NG68 377 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 OR1N1Q8NGS0 311 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 OR2T11Q8NH01 316 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 SUN3Q8TAQ9 357 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 PRR7Q8TB68 274 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 MGARPQ8TDB4 240 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 PPP4R1Q8TF05 950 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 TBC1D20Q96BZ9 403 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 SNRNP40Q96DI7 357 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 ATP6V1G3Q96LB4 118 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 OR1F2PQ96R84 312 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 CSF3RQ99062 836 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 EFCAB11Q9BUY7 163 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 ZNF700Q9H0M5 742 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 ACTR8Q9H981 624 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 AGPAT4Q9NRZ5 378 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 ASF1BQ9NVP2 202 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 PLA2G3Q9NZ20 509 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 STMN3Q9NZ72 180 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 SENP1Q9P0U3 644 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 TRPS1Q9UHF7 1281 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 TEKT2Q9UIF3 430 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 ZDHHC2Q9UIJ5 367 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 TMCO1Q9UM00 188 aa8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 TNRC6AQ8NDV7 1962 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-213ENST00000509357 DOCK10Q96BY6 2186 aa8.21□□□□□ -1.09
PDLIM5-213ENST00000509357 LOC102723996A0A087X1L8 192 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 A0A088AWK7 358 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 A0A1W2PS29 197 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 TCP11X1B4DZS4 312 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 FAM227AF5H4B4 570 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 MANBAO00462 879 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 TMPRSS11DO60235 418 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 UGDHO60701 494 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 TRIM13O60858 407 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 F10P00742 488 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 CELA2AP08217 269 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 CYC1P08574 325 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 ITGAMP11215 1152 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 TAC1P20366 129 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 ZNF10P21506 573 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 CERS1P27544 350 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 HPDP32754 393 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 BSGP35613 385 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 OR4D2P58180 307 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 RAE1P78406 368 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 GALNT1Q10472 559 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 TBL3Q12788 808 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 LCP2Q13094 533 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 DDX39BQ13838 428 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 NR6A1Q15406 480 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 CHI3L2Q15782 390 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 PRSS53Q2L4Q9 553 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 EIF2S3LQ2VIR3 472 aaKnown RBP8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 SFT2D3Q587I9 215 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 ARL13AQ5H913 290 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 PAGE2BQ5JRK9 111 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 B3GNTL1Q67FW5 361 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 GPRIN3Q6ZVF9 776 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 MILR1Q7Z6M3 343 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 ANKRD37Q7Z713 158 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 MYLK4Q86YV6 388 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 SLC22A9Q8IVM8 553 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 CA13Q8N1Q1 262 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 CCDC63Q8NA47 563 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 CATSPER1Q8NEC5 780 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 C11orf24Q96F05 449 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 C3orf30Q96M34 536 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 PTCHD1Q96NR3 888 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 LPAR4Q99677 370 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 ACPTQ9BZG2 426 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 COPS7BQ9H9Q2 264 aaPredicted RBP8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 KCNK13Q9HB14 408 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 MID1IP1Q9NPA3 183 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 KCNK9Q9NPC2 374 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 LANCL2Q9NS86 450 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 KCMF1Q9P0J7 381 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 ABI3Q9P2A4 366 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 GIMAP2Q9UG22 337 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 TSC22D4Q9Y3Q8 395 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 ANGPTL3Q9Y5C1 460 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 PCDHGA10Q9Y5H3 936 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 CSAG2Q9Y5P2 127 aa8.21□□□□□ -1.1
PDLIM5-213ENST00000509357 UBR5O95071 2799 aaPredicted RBP8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 RELNP78509 3460 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 TRAV17A0A0B4J275 112 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 ARHGAP10A1A4S6 786 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 ANKUB1A6NFN9 424 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 TM9SF1O15321 606 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 ERI3O43414 337 aaKnown RBP8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 B3GALT2O43825 422 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 NPHS1O60500 1241 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 PRMT3O60678 531 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 SCELO95171 688 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 ZWINTO95229 277 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 ESRRBO95718 433 aa8.2□□□□□ -1.1
PDLIM5-213ENST00000509357 OTCP00480 354 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms