RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 CLEC18CQ8NCF0 446 aa15.09■□□□□ 0.01
PDLIM5-212ENST00000509333 OR4F6Q8NGB9 312 aa15.09■□□□□ 0.01
PDLIM5-212ENST00000509333 ANKRD9Q96BM1 317 aaPredicted RBP15.09■□□□□ 0.01
PDLIM5-212ENST00000509333 CNDP1Q96KN2 507 aa15.09■□□□□ 0.01
PDLIM5-212ENST00000509333 MAGEB10Q96LZ2 347 aaPredicted RBP15.09■□□□□ 0.01
PDLIM5-212ENST00000509333 CDCP1Q9H5V8 836 aa15.09■□□□□ 0.01
PDLIM5-212ENST00000509333 DDX31Q9H8H2 851 aaKnown RBP15.09■□□□□ 0.01
PDLIM5-212ENST00000509333 PPCSQ9HAB8 311 aa15.09■□□□□ 0.01
PDLIM5-212ENST00000509333 PNO1Q9NRX1 252 aaKnown RBP15.09■□□□□ 0.01
PDLIM5-212ENST00000509333 EMCNQ9ULC0 261 aa15.09■□□□□ 0.01
PDLIM5-212ENST00000509333 VPS4AQ9UN37 437 aa15.09■□□□□ 0.01
PDLIM5-212ENST00000509333 TRAV17A0A0B4J275 112 aa15.08■□□□□ 0
PDLIM5-212ENST00000509333 MYOCOSA0A1B0GUC4 107 aa15.08■□□□□ 0
PDLIM5-212ENST00000509333 SAGE2PA6NJ88 616 aa15.08■□□□□ 0
PDLIM5-212ENST00000509333 PROM1O43490 865 aa15.08■□□□□ 0
PDLIM5-212ENST00000509333 SLU7O95391 586 aaKnown RBP15.08■□□□□ 0
PDLIM5-212ENST00000509333 GNLYP22749 145 aa15.08■□□□□ 0
PDLIM5-212ENST00000509333 ATP5F1P24539 256 aaPredicted RBP15.08■□□□□ 0
PDLIM5-212ENST00000509333 HERVK_113P63132 956 aa15.08■□□□□ 0
PDLIM5-212ENST00000509333 GGTA1PQ4G0N0 100 aa15.08■□□□□ 0
PDLIM5-212ENST00000509333 ZNF678Q5SXM1 525 aa15.08■□□□□ 0
PDLIM5-212ENST00000509333 FRG2Q64ET8 278 aa15.08■□□□□ 0
PDLIM5-212ENST00000509333 MRM1Q6IN84 353 aaKnown RBP15.08■□□□□ 0
PDLIM5-212ENST00000509333 CLNKQ7Z7G1 428 aa15.08■□□□□ 0
PDLIM5-212ENST00000509333 GPR180Q86V85 440 aa15.08■□□□□ 0
PDLIM5-212ENST00000509333 ARMC10Q8N2F6 343 aa15.08■□□□□ 0
PDLIM5-212ENST00000509333 APCDD1LQ8NCL9 501 aa15.08■□□□□ 0
PDLIM5-212ENST00000509333 MYRIPQ8NFW9 859 aa15.08■□□□□ 0
PDLIM5-212ENST00000509333 TRPC4APQ8TEL6 797 aa15.08■□□□□ 0
PDLIM5-212ENST00000509333 FRG2BQ96QU4 278 aa15.08■□□□□ 0
PDLIM5-212ENST00000509333 ERVK-6Q9BXR3 956 aa15.08■□□□□ 0
PDLIM5-212ENST00000509333 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.08■□□□□ 03e-8■■■□□ 14.8
PDLIM5-212ENST00000509333 FBXW2Q9UKT8 454 aa15.08■□□□□ 0
PDLIM5-212ENST00000509333 ATG4BQ9Y4P1 393 aa15.08■□□□□ 0
PDLIM5-212ENST00000509333 ASB4Q9Y574 426 aa15.08■□□□□ 0
PDLIM5-212ENST00000509333 SVILO95425 2214 aa15.07■□□□□ 0
PDLIM5-212ENST00000509333 BLACEA4D250 179 aa15.07■□□□□ 0
PDLIM5-212ENST00000509333 OR5H15A6NDH6 313 aa15.07■□□□□ 0
PDLIM5-212ENST00000509333 WASHC1A8K0Z3 465 aa15.07■□□□□ 0
PDLIM5-212ENST00000509333 EEDO75530 441 aaKnown RBP15.07■□□□□ 0
PDLIM5-212ENST00000509333 SUPT7LO94864 414 aa15.07■□□□□ 0
PDLIM5-212ENST00000509333 OTCP00480 354 aa15.07■□□□□ 0
PDLIM5-212ENST00000509333 CPN2P22792 545 aa15.07■□□□□ 0
PDLIM5-212ENST00000509333 CRHR1P34998 444 aa15.07■□□□□ 0
PDLIM5-212ENST00000509333 SSR2P43308 183 aa15.07■□□□□ 0
PDLIM5-212ENST00000509333 CCT5P48643 541 aa15.07■□□□□ 0
PDLIM5-212ENST00000509333 RAP1GDS1P52306 607 aa15.07■□□□□ 0
PDLIM5-212ENST00000509333 MLF1P58340 268 aa15.07■□□□□ 0
PDLIM5-212ENST00000509333 PHEXP78562 749 aa15.07■□□□□ 0
PDLIM5-212ENST00000509333 TERF2Q15554 542 aa15.07■□□□□ 0
PDLIM5-212ENST00000509333 C10orf62Q5T681 223 aaPredicted RBP15.07■□□□□ 0
PDLIM5-212ENST00000509333 LETMD1Q6P1Q0 360 aa15.07■□□□□ 0
PDLIM5-212ENST00000509333 LGI4Q8N135 537 aa15.07■□□□□ 0
PDLIM5-212ENST00000509333 BEST3Q8N1M1 668 aa15.07■□□□□ 0
PDLIM5-212ENST00000509333 SLC5A8Q8N695 610 aa15.07■□□□□ 0
PDLIM5-212ENST00000509333 B3GNT7Q8NFL0 401 aa15.07■□□□□ 0
PDLIM5-212ENST00000509333 GRHL3Q8TE85 626 aa15.07■□□□□ 0
PDLIM5-212ENST00000509333 PTPMT1Q8WUK0 201 aaPredicted RBP15.07■□□□□ 0
PDLIM5-212ENST00000509333 SERPINI1Q99574 410 aa15.07■□□□□ 0
PDLIM5-212ENST00000509333 CENPKQ9BS16 269 aa15.07■□□□□ 0
PDLIM5-212ENST00000509333 PRM3Q9NNZ6 103 aa15.07■□□□□ 0
PDLIM5-212ENST00000509333 MS4A12Q9NXJ0 267 aa15.07■□□□□ 0
PDLIM5-212ENST00000509333 A0A0A6YYD5 115 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 A0A1W2PR48 441 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 ESPNB1AK53 854 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 G3V2L1 256 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 CDK2AP1O14519 115 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 TMPRSS11DO60235 418 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 LDB3O75112 727 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 MYO1DO94832 1006 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 UQCRFS1P47985 274 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 ST13P50502 369 aaKnown RBP15.06■□□□□ 0
PDLIM5-212ENST00000509333 HNRNPH2P55795 449 aaKnown RBP15.06■□□□□ 0
PDLIM5-212ENST00000509333 TAS2R50P59544 299 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 IGLV3-21P80748 117 aaPredicted RBP15.06■□□□□ 0
PDLIM5-212ENST00000509333 SLC18A2Q05940 514 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 STX4Q12846 297 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 BIKQ13323 160 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 TUBA3CQ13748 450 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 UBAP2LQ14157 1087 aaKnown RBP15.06■□□□□ 0
PDLIM5-212ENST00000509333 EIF2S3LQ2VIR3 472 aaKnown RBP15.06■□□□□ 0
PDLIM5-212ENST00000509333 SGO1Q5FBB7 561 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 ZNF468Q5VIY5 522 aaPredicted RBP15.06■□□□□ 0
PDLIM5-212ENST00000509333 C18orf63Q68DL7 685 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 WDR93Q6P2C0 686 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 TUBA3EQ6PEY2 450 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 SLC22A9Q8IVM8 553 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 OR4N5Q8IXE1 308 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 TMEM132CQ8N3T6 1108 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 EPS8L3Q8TE67 593 aaKnown RBP15.06■□□□□ 0
PDLIM5-212ENST00000509333 AENQ8WTP8 325 aaKnown RBP15.06■□□□□ 0
PDLIM5-212ENST00000509333 FAR1Q8WVX9 515 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 TANKQ92844 425 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 UCN3Q969E3 161 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 TAAR6Q96RI8 345 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 DEFB126Q9BYW3 111 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 RPF2Q9H7B2 306 aaKnown RBP15.06■□□□□ 0
PDLIM5-212ENST00000509333 ADAP2Q9NPF8 381 aa15.06■□□□□ 0
PDLIM5-212ENST00000509333 FARSBQ9NSD9 589 aaKnown RBP15.06■□□□□ 0
PDLIM5-212ENST00000509333 MAP10Q9P2G4 905 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms