RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 C1GALT1Q9NS00 363 aa14.14□□□□□ -0.15
PHF3-209ENST00000509330 ADPRHL2Q9NX46 363 aa14.14□□□□□ -0.15
PHF3-209ENST00000509330 CCDC88CQ9P219 2028 aa14.14□□□□□ -0.15
PHF3-209ENST00000509330 KLHL33A6NCF5 533 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 H3BSA7 217 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 PRICKLE3O43900 615 aaPredicted RBP14.13□□□□□ -0.15
PHF3-209ENST00000509330 SEMA3DO95025 777 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 RRM2P31350 389 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 BTN3A2P78410 334 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 ILF3Q12906 894 aaKnown RBP eCLIP14.13□□□□□ -0.15
PHF3-209ENST00000509330 GANABQ14697 944 aaKnown RBP14.13□□□□□ -0.15
PHF3-209ENST00000509330 MEP1AQ16819 746 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 TRIM40Q6P9F5 258 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 CYP4Z1Q86W10 505 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 TRIM69Q86WT6 500 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 CCDC116Q8IYX3 515 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 ACOT4Q8N9L9 421 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 SCARF2Q96GP6 870 aaPredicted RBP14.13□□□□□ -0.15
PHF3-209ENST00000509330 RAB11FIP5Q9BXF6 653 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 MAPRE3Q9UPY8 281 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.13□□□□□ -0.15
PHF3-209ENST00000509330 NINQ8N4C6 2090 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 TRBC2A0A5B9 178 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 TMEM229AB2RXF0 380 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 F3P13726 295 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 TYRP1P17643 537 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 PPIBP23284 216 aaKnown RBP14.13□□□□□ -0.15
PHF3-209ENST00000509330 EPHA2P29317 976 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 PCGF2P35227 344 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 NCBP2P52298 156 aaKnown RBP eCLIP14.13□□□□□ -0.15
PHF3-209ENST00000509330 DGKEP52429 567 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 KCNJ10P78508 379 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 DUSP2Q05923 314 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 GAS6Q14393 721 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 IKBIPQ70UQ0 350 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 ZNF438Q7Z4V0 828 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 TAF8Q7Z7C8 310 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 PATL1Q86TB9 770 aaKnown RBP14.13□□□□□ -0.15
PHF3-209ENST00000509330 ATG16L2Q8NAA4 619 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 OR52E4Q8NGH9 312 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 RBM4BQ9BQ04 359 aaKnown RBP14.13□□□□□ -0.15
PHF3-209ENST00000509330 RBM4Q9BWF3 364 aaKnown RBP14.13□□□□□ -0.15
PHF3-209ENST00000509330 FOXQ1Q9C009 403 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 FAM118AQ9NWS6 357 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 KIF17Q9P2E2 1029 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 CORO2BQ9UQ03 480 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 PCDHGA8Q9Y5G5 932 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 DNAJB6O75190 326 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 CLEC3AO75596 197 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 THEGLP0DJG4 465 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 IGFBP5P24593 272 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 VEZF1Q14119 521 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 SLC9A5Q14940 896 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 WDR53Q7Z5U6 358 aaPredicted RBP14.13□□□□□ -0.15
PHF3-209ENST00000509330 ZFP28Q8NHY6 868 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 DNASE1L2Q92874 299 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 LMAN1LQ9HAT1 526 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 EQTNQ9NQ60 294 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 TMEM184CQ9NVA4 438 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 THUMPD1Q9NXG2 353 aaKnown RBP14.13□□□□□ -0.15
PHF3-209ENST00000509330 TRPC4Q9UBN4 977 aa14.13□□□□□ -0.15
PHF3-209ENST00000509330 TMEFF2Q9UIK5 374 aaPredicted RBP14.13□□□□□ -0.15
PHF3-209ENST00000509330 FANCMQ8IYD8 2048 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 A0A0A6YYD5 115 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 A0A1W2PR48 441 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 VIPP01282 170 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 IL1RNP18510 177 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 AGXTP21549 392 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 HIST1H1TP22492 207 aaPredicted RBP14.12□□□□□ -0.15
PHF3-209ENST00000509330 MAGEA2P43356 314 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 MAPK10P53779 464 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 DSTNP60981 165 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 C6orf120Q7Z4R8 191 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 ZNF555Q8NEP9 628 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 GOT1L1Q8NHS2 421 aaPredicted RBP14.12□□□□□ -0.15
PHF3-209ENST00000509330 SLC6A18Q96N87 628 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 GLIPR2Q9H4G4 154 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 POLMQ9NP87 494 aaPredicted RBP14.12□□□□□ -0.15
PHF3-209ENST00000509330 PCDHGA4Q9Y5G9 962 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 PABPC4LP0CB38 370 aaKnown RBP14.12□□□□□ -0.15
PHF3-209ENST00000509330 PCSK2P16519 638 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 GSTT1P30711 240 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 DAPP51397 102 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 NEDD8Q15843 81 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 FBXO43Q4G163 708 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 ABHD17CQ6PCB6 329 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 DCP2Q8IU60 420 aaKnown RBP14.12□□□□□ -0.15
PHF3-209ENST00000509330 OR4N5Q8IXE1 308 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 COL26A1Q96A83 441 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 QRFPRQ96P65 431 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 BBS4Q96RK4 519 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 DOHHQ9BU89 302 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 FAM192AQ9GZU8 254 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 REEP1Q9H902 201 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 LIN28AQ9H9Z2 209 aaKnown RBP14.12□□□□□ -0.15
PHF3-209ENST00000509330 STARD5Q9NSY2 213 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 HEBP2Q9Y5Z4 205 aa14.12□□□□□ -0.15
PHF3-209ENST00000509330 PRAMEF25A6NGN4 478 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 B4DGG1 531 aa14.11□□□□□ -0.15
PHF3-209ENST00000509330 CTSVO60911 334 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms