RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 CPSF7Q8N684 471 aaKnown RBP10.16□□□□□ -0.78
RNF4-212ENST00000509258 TTLQ8NG68 377 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 AGAP11Q8TF27 550 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 ZNF473Q8WTR7 871 aaKnown RBP10.16□□□□□ -0.78
RNF4-212ENST00000509258 UBTD2Q8WUN7 234 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 CHTF18Q8WVB6 975 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 ANP32BQ92688 251 aaKnown RBP10.16□□□□□ -0.78
RNF4-212ENST00000509258 NCLNQ969V3 563 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 C14orf79Q96F83 325 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 C16orf45Q96MC5 204 aaPredicted RBP10.16□□□□□ -0.78
RNF4-212ENST00000509258 MAPKAP1Q9BPZ7 522 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 SPOCK3Q9BQ16 436 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 REXO4Q9GZR2 422 aaKnown RBP10.16□□□□□ -0.78
RNF4-212ENST00000509258 RAB17Q9H0T7 212 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 EHD1Q9H4M9 534 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 PRTFDC1Q9NRG1 225 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 PNO1Q9NRX1 252 aaKnown RBP10.16□□□□□ -0.78
RNF4-212ENST00000509258 ZNF358Q9NW07 568 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 TXNDC16Q9P2K2 825 aa10.16□□□□□ -0.78
RNF4-212ENST00000509258 KLF13Q9Y2Y9 288 aaPredicted RBP10.16□□□□□ -0.78
RNF4-212ENST00000509258 INTS1Q8N201 2190 aaKnown RBP10.16□□□□□ -0.78
RNF4-212ENST00000509258 MED12Q93074 2177 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 A0A0G2JMM0 328 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 A0A1W2PPB8 328 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 A0A1W2PRS3 328 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 PINLYPA6NC86 204 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 WASHC1A8K0Z3 465 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 KIR3DP1A8MWS1 328 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 E9PLN8 166 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 KLRC4-KLRK1H3BQV0 150 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 CLGNO14967 610 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 B3GALT2O43825 422 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 NME2P1O60361 137 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 LDB3O75112 727 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 H2AFYO75367 372 aaKnown RBP10.15□□□□□ -0.78
RNF4-212ENST00000509258 PRKRAO75569 313 aaKnown RBP10.15□□□□□ -0.78
RNF4-212ENST00000509258 TGFB1P01137 390 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 ALDOAP04075 364 aaKnown RBP10.15□□□□□ -0.78
RNF4-212ENST00000509258 C2P06681 752 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 LTA4HP09960 611 aaKnown RBP10.15□□□□□ -0.78
RNF4-212ENST00000509258 NME2P22392 152 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 GSTM2P28161 218 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 STX2P32856 288 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 RFC3P40938 356 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 MSH2P43246 934 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 CLCN2P51788 898 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 IRF8Q02556 426 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 RCN2Q14257 317 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 DGAT2L6Q6ZPD8 337 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 RAPH1Q70E73 1250 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 LRRC70Q7Z2Q7 622 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 KRT78Q8N1N4 520 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 B3GNT7Q8NFL0 401 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 DOK4Q8TEW6 326 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 UCN3Q969E3 161 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 PTCD3Q96EY7 689 aaKnown RBP10.15□□□□□ -0.78
RNF4-212ENST00000509258 FAR2Q96K12 515 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 VKORC1Q9BQB6 163 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 CCDC77Q9BR77 488 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 NPLQ9BXD5 320 aaPredicted RBP10.15□□□□□ -0.78
RNF4-212ENST00000509258 ZNF717Q9BY31 904 aaPredicted RBP10.15□□□□□ -0.78
RNF4-212ENST00000509258 DEFB126Q9BYW3 111 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 OR51B5Q9H339 312 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 TRIM45Q9H8W5 580 aaPredicted RBP10.15□□□□□ -0.78
RNF4-212ENST00000509258 SNX15Q9NRS6 342 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 NUDT4Q9NZJ9 180 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 ITGB1BP2Q9UKP3 347 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 DAPP1Q9UN19 280 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 PPIEQ9UNP9 301 aaKnown RBP10.15□□□□□ -0.78
RNF4-212ENST00000509258 MRPS33Q9Y291 106 aaKnown RBP10.15□□□□□ -0.78
RNF4-212ENST00000509258 MMACHCQ9Y4U1 282 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 ARHGAP21Q5T5U3 1957 aa10.15□□□□□ -0.78
RNF4-212ENST00000509258 ZFHX3Q15911 3703 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 ANKDD1BA6NHY2 528 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 K7EPI3 171 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 CLDN4O14493 209 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 TFECO14948 347 aaPredicted RBP10.14□□□□□ -0.79
RNF4-212ENST00000509258 SIX3O95343 332 aaPredicted RBP10.14□□□□□ -0.79
RNF4-212ENST00000509258 ETHE1O95571 254 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 PCNAP12004 261 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 ATP5A1P25705 553 aaKnown RBP10.14□□□□□ -0.79
RNF4-212ENST00000509258 PTGER1P34995 402 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 CASP2P42575 452 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 KIR3DL1P43629 444 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 MTTPP55157 894 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 CAV1Q03135 178 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 TERF2Q15554 542 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 TBCCQ15814 346 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 TMEM211Q6ICI0 200 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 C8orf74Q6P047 294 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 TRIM40Q6P9F5 258 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 PAOXQ6QHF9 649 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 MDGA2Q7Z553 956 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 CDH24Q86UP0 819 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 DOLPP1Q86YN1 238 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 LAS2Q8IYD9 372 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 TMEM156Q8N614 296 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 ACOT4Q8N9L9 421 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 C7orf57Q8NEG2 295 aa10.14□□□□□ -0.79
RNF4-212ENST00000509258 OR7G3Q8NG95 312 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms