RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 PAFAH1B1P43034 410 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 MAGEA3P43357 314 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 BDKRB1P46663 353 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 RPL21P46778 160 aaKnown RBP4.34□□□□□ -1.71
NUP54-206ENST00000508465 CARSP49589 748 aaKnown RBP4.34□□□□□ -1.71
NUP54-206ENST00000508465 ITGA8P53708 1063 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 FOXL2P58012 376 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 RPS18P62269 152 aaKnown RBP4.34□□□□□ -1.71
NUP54-206ENST00000508465 TIAL1Q01085 375 aaKnown RBP eCLIP4.34□□□□□ -1.71
NUP54-206ENST00000508465 C2orf54Q08AI8 447 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 MGAT2Q10469 447 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 GPS2Q13227 327 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 CUL1Q13616 776 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 TSTA3Q13630 321 aaPredicted RBP4.34□□□□□ -1.71
NUP54-206ENST00000508465 PTK6Q13882 451 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 FASTKQ14296 549 aaKnown RBP4.34□□□□□ -1.71
NUP54-206ENST00000508465 GRB7Q14451 532 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 TRADDQ15628 312 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 KYNUQ16719 465 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 LONRF1Q17RB8 773 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 KLHL38Q2WGJ6 581 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 DEFB110Q30KQ9 67 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 GFOD2Q3B7J2 385 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 DNAJC21Q5F1R6 531 aaKnown RBP4.34□□□□□ -1.71
NUP54-206ENST00000508465 PLEKHS1Q5SXH7 462 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 TMTC4Q5T4D3 741 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 C1orf189Q5VU69 101 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 RUSC1-AS1Q66K80 236 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 AWAT2Q6E213 333 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 KIAA0930Q6ICG6 404 aaPredicted RBP4.34□□□□□ -1.71
NUP54-206ENST00000508465 SLC18B1Q6NT16 456 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 SPESP1Q6UW49 350 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 CDHR3Q6ZTQ4 885 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 PPP1R3BQ86XI6 285 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 TMEM126BQ8IUX1 230 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 TBC1D21Q8IYX1 336 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 ADGRG5Q8IZF4 528 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 ZNF843Q8N446 348 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 ZBTB2Q8N680 514 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 LINC01555Q8NAE3 123 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 OR1L3Q8NH93 324 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 OR5K2Q8NHB8 316 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 FLVCR1-AS1Q8TAF5 88 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 CT55Q8WUE5 264 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 EEF1AKMT1Q8WVE0 214 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 MR1Q95460 341 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 ZNF501Q96CX3 271 aaPredicted RBP4.34□□□□□ -1.71
NUP54-206ENST00000508465 TEFMQ96QE5 360 aaKnown RBP4.34□□□□□ -1.71
NUP54-206ENST00000508465 CD180Q99467 661 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 NDNQ99608 321 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 EBNA1BP2Q99848 306 aaKnown RBP4.34□□□□□ -1.71
NUP54-206ENST00000508465 ZPBPQ9BS86 351 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 ALG8Q9BVK2 526 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 ACAT2Q9BWD1 397 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 TSSK1BQ9BXA7 367 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 B3GNT4Q9C0J1 378 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 CHST8Q9H2A9 424 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 DPH5Q9H2P9 285 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 MRM3Q9HC36 420 aaKnown RBP4.34□□□□□ -1.71
NUP54-206ENST00000508465 PDE7BQ9NP56 450 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 PPANQ9NQ55 473 aaKnown RBP4.34□□□□□ -1.71
NUP54-206ENST00000508465 POLG2Q9UHN1 485 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 GNPTGQ9UJJ9 305 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 SERTAD3Q9UJW9 196 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 FBXO5Q9UKT4 447 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 RARRES3Q9UL19 164 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 SLC39A10Q9ULF5 831 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 CHMP2BQ9UQN3 213 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 TMEM184BQ9Y519 407 aaPredicted RBP4.34□□□□□ -1.71
NUP54-206ENST00000508465 FAM169AQ9Y6X4 670 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 PIKFYVEQ9Y2I7 2098 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 SPTBP11277 2137 aa4.34□□□□□ -1.71
NUP54-206ENST00000508465 FAM208BQ5VWN6 2430 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 ZNF106Q9H2Y7 1883 aaKnown RBP4.33□□□□□ -1.72
NUP54-206ENST00000508465 ARHGEF33A8MVX0 844 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 EFCAB8A8MWE9 144 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 E5RI56 91 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 E7ENX8 843 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 F8W8V4 182 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 QSOX1O00391 747 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 RASGRF2O14827 1237 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 ZNF749O43361 778 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 RAD51CO43502 376 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 JTBO76095 146 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 USP1O94782 785 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 C1orf105O95561 183 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 SYF2O95926 243 aaKnown RBP4.33□□□□□ -1.72
NUP54-206ENST00000508465 STATHP02808 62 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 AMY1AP04745 511 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 NR2F6P10588 404 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 CYP2A7P20853 494 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 SAT1P21673 171 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 CD9P21926 228 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 RPS3P23396 243 aaKnown RBP eCLIP4.33□□□□□ -1.72
NUP54-206ENST00000508465 CCND1P24385 295 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 OAS2P29728 719 aaKnown RBP4.33□□□□□ -1.72
NUP54-206ENST00000508465 PKLRP30613 574 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 CDKN2DP55273 166 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 TUBB4BP68371 445 aa4.33□□□□□ -1.72
NUP54-206ENST00000508465 RHDQ02161 417 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms