RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 EML6Q6ZMW3 1958 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 AKAP9Q99996 3911 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 SYNDIG1LA6NDD5 238 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 SUPT3HB4E1H0 165 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 KLRC4-KLRK1H3BQV0 150 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 RTCAO00442 366 aaKnown RBP12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 PEX1O43933 1283 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 HS6ST1O60243 411 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 CTNSO60931 367 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 KERAO60938 352 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 SUPT3HO75486 399 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 OR2J2O76002 312 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 SNRPB2P08579 225 aaKnown RBP12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 ATP5A1P25705 553 aaKnown RBP12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 STX2P32856 288 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 PTGER4P35408 488 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 MSH2P43246 934 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 SSR4P51571 173 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 SMSP52788 366 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 GPR85P60893 370 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 CAV1Q03135 178 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 TGM3Q08188 693 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 NAB1Q13506 487 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 RCN2Q14257 317 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 CMPK2Q5EBM0 449 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 C3P1Q6ZMU1 363 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 GDF7Q7Z4P5 450 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 CCDC25Q86WR0 208 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 DOLPP1Q86YN1 238 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 LAS2Q8IYD9 372 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 C17orf53Q8N3J3 647 aaPredicted RBP12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 ZNF321PQ8N8H1 164 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 C16orf52Q8NHV5 167 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 STAG3L4Q8TBR4 150 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 PHF10Q8WUB8 498 aaKnown RBP12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 PTPMT1Q8WUK0 201 aaPredicted RBP12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 ANP32BQ92688 251 aaKnown RBP12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 DMRTA2Q96SC8 542 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 MAPKAP1Q9BPZ7 522 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 TRIM8Q9BZR9 551 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 LIN28AQ9H9Z2 209 aaKnown RBP12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 DEPPQ9NTK1 212 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 YARS2Q9Y2Z4 477 aaKnown RBP12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 UTP11Q9Y3A2 253 aaKnown RBP12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 CLCA3PQ9Y6N3 262 aa12.09□□□□□ -0.47
HMGCS1-205ENST00000508319 MYOCOSA0A1B0GUC4 107 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 A8MVJ9 347 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 E9PLN8 166 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 C19orf84I3L1E1 186 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 UBXN8O00124 270 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 PRRG2O14669 202 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 LDB3O75112 727 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 ZFAND5O76080 213 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 CLDN14O95500 239 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 TUBB4AP04350 444 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 IFNA16P05015 189 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 LTA4HP09960 611 aaKnown RBP12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 MTHFD2P13995 350 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 HIST1H1TP22492 207 aaPredicted RBP12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 SOX3P41225 446 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 MAGEA4P43358 317 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 HK2P52789 917 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 PCDH1Q08174 1060 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 HIST2H2ACQ16777 129 aaPredicted RBP12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 TMEM35AQ53FP2 167 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 HIST2H2AA3Q6FI13 130 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 RAPH1Q70E73 1250 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 TBC1D1Q86TI0 1168 aaPredicted RBP12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 CENPLQ8N0S6 344 aaPredicted RBP12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 TMEM132CQ8N3T6 1108 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 ACOT4Q8N9L9 421 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 MORN4Q8NDC4 146 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 PSD4Q8NDX1 1056 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 SRFBP1Q8NEF9 429 aaKnown RBP12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 OR14A16Q8NHC5 309 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 FBF1Q8TES7 1133 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 SREK1Q8WXA9 508 aaKnown RBP12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 DAZLQ92904 295 aaKnown RBP12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 UBE2E3Q969T4 207 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 VKORC1Q9BQB6 163 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 TBCDQ9BTW9 1192 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 ALOXE3Q9BYJ1 711 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 ROGDIQ9GZN7 287 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 RAB17Q9H0T7 212 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 RUBCNLQ9H714 662 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 NMRAL1Q9HBL8 299 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 TIMMDC1Q9NPL8 285 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 HPF1Q9NWY4 346 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 MYOTQ9UBF9 498 aa12.08□□□□□ -0.48
HMGCS1-205ENST00000508319 A0A0G2JMM0 328 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 A0A1B0GTH9 108 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 A0A1W2PPB8 328 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 A0A1W2PRS3 328 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 PINLYPA6NC86 204 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 KIR3DP1A8MWS1 328 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 K7EPI3 171 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 ANKRD17O75179 2603 aaKnown RBP12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 SH3BGRLO75368 114 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 OR6B1O95007 311 aa12.07□□□□□ -0.48
HMGCS1-205ENST00000508319 TGFB1P01137 390 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms