RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 FAM83EQ2M2I3 478 aa13.3□□□□□ -0.28
RAB28-205ENST00000508274 RNFT1Q5M7Z0 435 aa13.3□□□□□ -0.28
RAB28-205ENST00000508274 MYLK4Q86YV6 388 aaPredicted RBP13.3□□□□□ -0.28
RAB28-205ENST00000508274 SIAH3Q8IW03 269 aa13.3□□□□□ -0.28
RAB28-205ENST00000508274 PLD6Q8N2A8 252 aaKnown RBP13.3□□□□□ -0.28
RAB28-205ENST00000508274 ZNF321PQ8N8H1 164 aa13.3□□□□□ -0.28
RAB28-205ENST00000508274 CCDC120Q96HB5 630 aa13.3□□□□□ -0.28
RAB28-205ENST00000508274 ALOXE3Q9BYJ1 711 aa13.3□□□□□ -0.28
RAB28-205ENST00000508274 VPS11Q9H270 941 aa13.3□□□□□ -0.28
RAB28-205ENST00000508274 TRIM45Q9H8W5 580 aaPredicted RBP13.3□□□□□ -0.28
RAB28-205ENST00000508274 LYRM4Q9HD34 91 aa13.3□□□□□ -0.28
RAB28-205ENST00000508274 ZNF358Q9NW07 568 aa13.3□□□□□ -0.28
RAB28-205ENST00000508274 NCOA6Q14686 2063 aaPredicted RBP13.3□□□□□ -0.28
RAB28-205ENST00000508274 TMEM200CA6NKL6 621 aa13.29□□□□□ -0.28
RAB28-205ENST00000508274 CTNSO60931 367 aa13.29□□□□□ -0.28
RAB28-205ENST00000508274 KLHL2O95198 593 aa13.29□□□□□ -0.28
RAB28-205ENST00000508274 SIX3O95343 332 aaPredicted RBP13.29□□□□□ -0.28
RAB28-205ENST00000508274 HIST1H1TP22492 207 aaPredicted RBP13.29□□□□□ -0.28
RAB28-205ENST00000508274 TYK2P29597 1187 aa13.29□□□□□ -0.28
RAB28-205ENST00000508274 ECHS1P30084 290 aa13.29□□□□□ -0.28
RAB28-205ENST00000508274 PHBP35232 272 aa13.29□□□□□ -0.28
RAB28-205ENST00000508274 RFC3P40938 356 aa13.29□□□□□ -0.28
RAB28-205ENST00000508274 SSR2P43308 183 aa13.29□□□□□ -0.28
RAB28-205ENST00000508274 ACAP2Q15057 778 aa13.29□□□□□ -0.28
RAB28-205ENST00000508274 ELAVL1Q15717 326 aaKnown RBP13.29□□□□□ -0.28
RAB28-205ENST00000508274 TECRLQ5HYJ1 363 aa13.29□□□□□ -0.28
RAB28-205ENST00000508274 KHDRBS2Q5VWX1 349 aaKnown RBP13.29□□□□□ -0.28
RAB28-205ENST00000508274 MDGA2Q7Z553 956 aa13.29□□□□□ -0.28
RAB28-205ENST00000508274 MMGT1Q8N4V1 131 aa13.29□□□□□ -0.28
RAB28-205ENST00000508274 FAM98AQ8NCA5 519 aaKnown RBP13.29□□□□□ -0.28
RAB28-205ENST00000508274 SRFBP1Q8NEF9 429 aaKnown RBP13.29□□□□□ -0.28
RAB28-205ENST00000508274 HUS1BQ8NHY5 278 aa13.29□□□□□ -0.28
RAB28-205ENST00000508274 PTPMT1Q8WUK0 201 aaPredicted RBP13.29□□□□□ -0.28
RAB28-205ENST00000508274 ITLN2Q8WWU7 325 aaPredicted RBP13.29□□□□□ -0.28
RAB28-205ENST00000508274 UBE2E3Q969T4 207 aa13.29□□□□□ -0.28
RAB28-205ENST00000508274 MTERF1Q99551 399 aaKnown RBP13.29□□□□□ -0.28
RAB28-205ENST00000508274 TBCDQ9BTW9 1192 aa13.29□□□□□ -0.28
RAB28-205ENST00000508274 DMRT3Q9NQL9 472 aa13.29□□□□□ -0.28
RAB28-205ENST00000508274 CPSF2Q9P2I0 782 aaKnown RBP13.29□□□□□ -0.28
RAB28-205ENST00000508274 MTRF1LQ9UGC7 380 aaKnown RBP13.29□□□□□ -0.28
RAB28-205ENST00000508274 ANGPTL3Q9Y5C1 460 aa13.29□□□□□ -0.28
RAB28-205ENST00000508274 KLK8O60259 260 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 SCELO95171 688 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 ZNF24P17028 368 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 ALDH18A1P54886 795 aaKnown RBP13.28□□□□□ -0.28
RAB28-205ENST00000508274 GPR85P60893 370 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 RBPJQ06330 500 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 AP5B1Q2VPB7 878 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 TMEM35AQ53FP2 167 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 GOLGA7Q7Z5G4 137 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 CCDC91Q7Z6B0 441 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 RELL1Q8IUW5 271 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 CYP4Z2PQ8N1L4 340 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 TMEM156Q8N614 296 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 SLC44A1Q8WWI5 657 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 IFT81Q8WYA0 676 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 TMEM125Q96AQ2 219 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 ANKRD9Q96BM1 317 aaPredicted RBP13.28□□□□□ -0.28
RAB28-205ENST00000508274 CMTM7Q96FZ5 175 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 MAGED4Q96JG8 741 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 ROGDIQ9GZN7 287 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 VTI1BQ9UEU0 232 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 CLCA3PQ9Y6N3 262 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 PLPP1O14494 284 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 ASNA1O43681 348 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 PRKRAO75569 313 aaKnown RBP13.28□□□□□ -0.28
RAB28-205ENST00000508274 OR2J2O76002 312 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 CPN2P22792 545 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 PIK3CGP48736 1102 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 MEOX1P50221 254 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 RPS13P62277 151 aaKnown RBP13.28□□□□□ -0.28
RAB28-205ENST00000508274 STX4Q12846 297 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 SLAMF1Q13291 335 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 GTF2H2Q13888 395 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 RCN2Q14257 317 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 PCBP2Q15366 365 aaKnown RBP eCLIP13.28□□□□□ -0.28
RAB28-205ENST00000508274 DEPDC1Q5TB30 811 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 OR4C11Q6IEV9 310 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 GTF2H2CQ6P1K8 395 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 NCCRP1Q6ZVX7 275 aaPredicted RBP13.28□□□□□ -0.28
RAB28-205ENST00000508274 CHSY3Q70JA7 882 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 SULF2Q8IWU5 870 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 CHERPQ8IWX8 916 aaKnown RBP13.28□□□□□ -0.28
RAB28-205ENST00000508274 OR4N5Q8IXE1 308 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 TMEM132CQ8N3T6 1108 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 UHMK1Q8TAS1 419 aaKnown RBP13.28□□□□□ -0.28
RAB28-205ENST00000508274 PAFAH2Q99487 392 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 FMO2Q99518 471 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 CCDC77Q9BR77 488 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 FUT8Q9BYC5 575 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 OR8D2Q9GZM6 311 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 ACTR8Q9H981 624 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 SUCOQ9UBS9 1254 aaKnown RBP13.28□□□□□ -0.28
RAB28-205ENST00000508274 ZNF835Q9Y2P0 537 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 KLF13Q9Y2Y9 288 aaPredicted RBP13.28□□□□□ -0.28
RAB28-205ENST00000508274 LRBAP50851 2863 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 ADGRG4Q8IZF6 3080 aa13.28□□□□□ -0.28
RAB28-205ENST00000508274 C17orf105B2RV13 164 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 PRSS44E7EML9 344 aa13.27□□□□□ -0.29
RAB28-205ENST00000508274 WWP2O00308 870 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms