RNA–Protein interactions for RNA: ENST00000508085.1

CDHR2-204, Transcript of cadherin related family member 2, human

TSL 2

Gene CDHR2, Length 577 nt, Biotype retained intron, Subcellular localisation Exosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDHR2-204	ENST00000508085	SBK3	P0C264	359 aa		12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	FAM153B	P0C7A2	387 aa		12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	EEF1D	P29692	281 aa	Known RBP	12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	PIK3CB	P42338	1070 aa		12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	SSR2	P43308	183 aa		12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	FAM153C	Q494X1	144 aa		12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	DEPDC1	Q5TB30	811 aa		12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	LIPJ	Q5W064	366 aa		12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	CHSY3	Q70JA7	882 aa		12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	TAOK1	Q7L7X3	1001 aa		12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	MYLK4	Q86YV6	388 aa	Predicted RBP	12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	L3MBTL4	Q8NA19	623 aa		12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	SRFBP1	Q8NEF9	429 aa	Known RBP	12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	DNAJB8	Q8NHS0	232 aa		12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	C5orf34	Q96MH7	638 aa		12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	NSUN5	Q96P11	429 aa	Known RBP	12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	MTERF1	Q99551	399 aa	Known RBP	12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	ZNF717	Q9BY31	904 aa	Predicted RBP	12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	DEFB126	Q9BYW3	111 aa		12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	TRIM45	Q9H8W5	580 aa	Predicted RBP	12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	IPPK	Q9H8X2	491 aa		12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	ACTR8	Q9H981	624 aa		12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	LRFN1	Q9P244	771 aa		12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	PCTP	Q9UKL6	214 aa		12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	IKBKG	Q9Y6K9	419 aa		12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	NCKAP5	O14513	1909 aa		12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	CACNA1C	Q13936	2221 aa		12.84	□□□□□ -0.35
CDHR2-204	ENST00000508085	ASPDH	A6ND91	283 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085		H0YIV9	168 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	OR7A17	O14581	309 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	LRRTM2	O43300	516 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	ETHE1	O95571	254 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	CLDN1	O95832	211 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	CRYAB	P02511	175 aa	Known RBP	12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	SP1	P08047	785 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	STS	P08842	583 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	RBP1	P09455	135 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	RHOXF2B	P0C7M4	288 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	MYBL2	P10244	700 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	COL6A2	P12110	1019 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	CNTF	P26441	200 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	TRHR	P34981	398 aa	Predicted RBP	12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	PIK3CG	P48736	1102 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	CLCN2	P51788	898 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	RPS13	P62277	151 aa	Known RBP	12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	ID2	Q02363	134 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	OC90	Q02509	493 aa	Predicted RBP	12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	TRAF3	Q13114	568 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	RCN2	Q14257	317 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	ELAVL1	Q15717	326 aa	Known RBP	12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	TSNAXIP1	Q2TAA8	658 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	AP5B1	Q2VPB7	878 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	C4orf17	Q53FE4	359 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	OR4C11	Q6IEV9	310 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	METTL2B	Q6P1Q9	378 aa	Known RBP	12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	GALNTL5	Q7Z4T8	443 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	TMEM151A	Q8N4L1	468 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	ZNF321P	Q8N8H1	164 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	OR52B6	Q8NGF0	335 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	WDR20	Q8TBZ3	569 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	THAP3	Q8WTV1	239 aa	Predicted RBP	12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	PTPMT1	Q8WUK0	201 aa	Predicted RBP	12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	ANKRD9	Q96BM1	317 aa	Predicted RBP	12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	PHF21B	Q96EK2	531 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	VMP1	Q96GC9	406 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	SCYL1	Q96KG9	808 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	FRMD6	Q96NE9	622 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	CDK15	Q96Q40	435 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	RHOXF2	Q9BQY4	288 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	ALOXE3	Q9BYJ1	711 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	TXLNGY	Q9BZA5	131 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	EPB41L4B	Q9H329	900 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	NOL11	Q9H8H0	719 aa	Known RBP	12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	ZBTB26	Q9HCK0	441 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	ADGRE2	Q9UHX3	823 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	FBXW2	Q9UKT8	454 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	PCDHGA11	Q9Y5H2	935 aa		12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	TNPO3	Q9Y5L0	923 aa	Known RBP	12.83	□□□□□ -0.36
CDHR2-204	ENST00000508085	FREM3	P0C091	2139 aa		12.82	□□□□□ -0.36
CDHR2-204	ENST00000508085	EXOC1L	A0A1B0GW35	172 aa		12.82	□□□□□ -0.36
CDHR2-204	ENST00000508085	TMEM200C	A6NKL6	621 aa		12.82	□□□□□ -0.36
CDHR2-204	ENST00000508085	STX16-NPEPL1	H3BU86	382 aa		12.82	□□□□□ -0.36
CDHR2-204	ENST00000508085	STX16	O14662	325 aa		12.82	□□□□□ -0.36
CDHR2-204	ENST00000508085	RIPK2	O43353	540 aa		12.82	□□□□□ -0.36
CDHR2-204	ENST00000508085	NME2P1	O60361	137 aa		12.82	□□□□□ -0.36
CDHR2-204	ENST00000508085	EED	O75530	441 aa	Known RBP	12.82	□□□□□ -0.36
CDHR2-204	ENST00000508085	SLC25A12	O75746	678 aa		12.82	□□□□□ -0.36
CDHR2-204	ENST00000508085	UNC5C	O95185	931 aa		12.82	□□□□□ -0.36
CDHR2-204	ENST00000508085	CD46	P15529	392 aa		12.82	□□□□□ -0.36
CDHR2-204	ENST00000508085	NME2	P22392	152 aa		12.82	□□□□□ -0.36
CDHR2-204	ENST00000508085	BSG	P35613	385 aa		12.82	□□□□□ -0.36
CDHR2-204	ENST00000508085	HLCS	P50747	726 aa		12.82	□□□□□ -0.36
CDHR2-204	ENST00000508085	NEK2	P51955	445 aa		12.82	□□□□□ -0.36
CDHR2-204	ENST00000508085	RAP1GDS1	P52306	607 aa		12.82	□□□□□ -0.36
CDHR2-204	ENST00000508085	HNRNPH2	P55795	449 aa	Known RBP	12.82	□□□□□ -0.36
CDHR2-204	ENST00000508085	IGLV3-21	P80748	117 aa	Predicted RBP	12.82	□□□□□ -0.36
CDHR2-204	ENST00000508085	SLAMF1	Q13291	335 aa		12.82	□□□□□ -0.36
CDHR2-204	ENST00000508085	ZRSR2	Q15696	482 aa	Known RBP	12.82	□□□□□ -0.36
CDHR2-204	ENST00000508085	CPSF6	Q16630	551 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
CDHR2-204	ENST00000508085	C1QL3	Q5VWW1	255 aa		12.82	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms