RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 DTWD1Q8N5C7 304 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 PLPP5Q8NEB5 264 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 OR2T11Q8NH01 316 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 ACTRT2Q8TDY3 377 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 STON2Q8WXE9 905 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 STARD8Q92502 1023 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 CHMP6Q96FZ7 201 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 PPP1R36Q96LQ0 422 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 C3orf30Q96M34 536 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 ACTL8Q9H568 366 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 SOX17Q9H6I2 414 aaPredicted RBP18.93■□□□□ 0.62
USP53-203ENST00000507597 RPF2Q9H7B2 306 aaKnown RBP18.93■□□□□ 0.62
USP53-203ENST00000507597 AKTIPQ9H8T0 292 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 PRTFDC1Q9NRG1 225 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 FAM53CQ9NYF3 392 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 KCMF1Q9P0J7 381 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 C3orf18Q9UK00 162 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 ASB4Q9Y574 426 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 PTGDR2Q9Y5Y4 395 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 SPEGQ15772 3267 aa18.93■□□□□ 0.62
USP53-203ENST00000507597 B4GALT2O60909 372 aa18.92■□□□□ 0.62
USP53-203ENST00000507597 CTNSO60931 367 aa18.92■□□□□ 0.62
USP53-203ENST00000507597 CREG1O75629 220 aa18.92■□□□□ 0.62
USP53-203ENST00000507597 GBAP04062 536 aa18.92■□□□□ 0.62
USP53-203ENST00000507597 LIFP15018 202 aa18.92■□□□□ 0.62
USP53-203ENST00000507597 ALOX15P16050 662 aaPredicted RBP18.92■□□□□ 0.62
USP53-203ENST00000507597 KLC1Q07866 573 aa18.92■□□□□ 0.62
USP53-203ENST00000507597 SLC13A2Q13183 592 aa18.92■□□□□ 0.62
USP53-203ENST00000507597 SERTAD2Q14140 314 aa18.92■□□□□ 0.62
USP53-203ENST00000507597 RFTN2Q52LD8 501 aaPredicted RBP18.92■□□□□ 0.62
USP53-203ENST00000507597 CRTC2Q53ET0 693 aaPredicted RBP18.92■□□□□ 0.62
USP53-203ENST00000507597 MTERF4Q7Z6M4 381 aaKnown RBP18.92■□□□□ 0.62
USP53-203ENST00000507597 PROSER1Q86XN7 944 aa18.92■□□□□ 0.62
USP53-203ENST00000507597 C16orf78Q8WTQ4 265 aa18.92■□□□□ 0.62
USP53-203ENST00000507597 C11orf24Q96F05 449 aaPredicted RBP18.92■□□□□ 0.62
USP53-203ENST00000507597 DCBLD2Q96PD2 775 aa18.92■□□□□ 0.62
USP53-203ENST00000507597 SPSB2Q99619 263 aa18.92■□□□□ 0.62
USP53-203ENST00000507597 CCDC28BQ9BUN5 200 aa18.92■□□□□ 0.62
USP53-203ENST00000507597 MRGBPQ9NV56 204 aa18.92■□□□□ 0.62
USP53-203ENST00000507597 POLR3HQ9Y535 204 aaPredicted RBP18.92■□□□□ 0.62
USP53-203ENST00000507597 SDK2Q58EX2 2172 aa18.92■□□□□ 0.62
USP53-203ENST00000507597 IDSB3KWA1 339 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 CYR61O00622 381 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 PEX12O00623 359 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 SDHDO14521 159 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 TMPRSS11DO60235 418 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 KLF7O75840 302 aaPredicted RBP18.91■□□□□ 0.62
USP53-203ENST00000507597 AQP5P55064 265 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 TAS2R50P59544 299 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 STX4Q12846 297 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 RPS6KA2Q15349 733 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 NDUFAF5Q5TEU4 345 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 OR52E8Q6IFG1 317 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 OGFOD2Q6N063 350 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 EPGNQ6UW88 154 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 LARP4Q71RC2 724 aaKnown RBP eCLIP18.91■□□□□ 0.62
USP53-203ENST00000507597 R3HCC1LQ7Z5L2 792 aaKnown RBP18.91■□□□□ 0.62
USP53-203ENST00000507597 PRSS58Q8IYP2 241 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 FAM47BQ8NA70 645 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 KDF1Q8NAX2 398 aaPredicted RBP18.91■□□□□ 0.62
USP53-203ENST00000507597 TM4SF18Q96CE8 201 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 MAELQ96JY0 434 aaKnown RBP18.91■□□□□ 0.62
USP53-203ENST00000507597 FCRL1Q96LA6 429 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 PTCHD1Q96NR3 888 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 PRPF18Q99633 342 aaKnown RBP18.91■□□□□ 0.62
USP53-203ENST00000507597 EBPLQ9BY08 206 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 MYNNQ9NPC7 610 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 MIEF1Q9NQG6 463 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 GIMAP4Q9NUV9 329 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 ASIC5Q9NY37 505 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 TRIM33Q9UPN9 1127 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 DLGAP4Q9Y2H0 992 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 ATG4BQ9Y4P1 393 aa18.91■□□□□ 0.62
USP53-203ENST00000507597 TERTO14746 1132 aaKnown RBP18.9■□□□□ 0.62
USP53-203ENST00000507597 DYRK3O43781 588 aa18.9■□□□□ 0.62
USP53-203ENST00000507597 ALOX12BO75342 701 aa18.9■□□□□ 0.62
USP53-203ENST00000507597 CAPNS1P04632 268 aa18.9■□□□□ 0.62
USP53-203ENST00000507597 PRR35P0CG20 571 aa18.9■□□□□ 0.62
USP53-203ENST00000507597 C8orf89P0DMQ9 161 aa18.9■□□□□ 0.62
USP53-203ENST00000507597 MMP11P24347 488 aa18.9■□□□□ 0.62
USP53-203ENST00000507597 EPHA3P29320 983 aa18.9■□□□□ 0.62
USP53-203ENST00000507597 HNRNPH2P55795 449 aaKnown RBP18.9■□□□□ 0.62
USP53-203ENST00000507597 SNRPNP63162 240 aaKnown RBP18.9■□□□□ 0.62
USP53-203ENST00000507597 GNGT1P63211 74 aa18.9■□□□□ 0.62
USP53-203ENST00000507597 RAE1P78406 368 aaKnown RBP18.9■□□□□ 0.62
USP53-203ENST00000507597 ACTN3Q08043 901 aaPredicted RBP18.9■□□□□ 0.62
USP53-203ENST00000507597 C2orf80Q0P641 193 aa18.9■□□□□ 0.62
USP53-203ENST00000507597 COL9A2Q14055 689 aaPredicted RBP18.9■□□□□ 0.62
USP53-203ENST00000507597 NSDHLQ15738 373 aa18.9■□□□□ 0.62
USP53-203ENST00000507597 IL23RQ5VWK5 629 aa18.9■□□□□ 0.62
USP53-203ENST00000507597 CCDC81Q6ZN84 652 aa18.9■□□□□ 0.62
USP53-203ENST00000507597 CDC26Q8NHZ8 85 aa18.9■□□□□ 0.62
USP53-203ENST00000507597 THAP4Q8WY91 577 aa18.9■□□□□ 0.62
USP53-203ENST00000507597 RILPQ96NA2 401 aa18.9■□□□□ 0.62
USP53-203ENST00000507597 PELOQ9BRX2 385 aaKnown RBP18.9■□□□□ 0.62
USP53-203ENST00000507597 NPHS2Q9NP85 383 aa18.9■□□□□ 0.62
USP53-203ENST00000507597 TCF7L2Q9NQB0 619 aa18.9■□□□□ 0.62
USP53-203ENST00000507597 FGFR1OP2Q9NVK5 253 aa18.9■□□□□ 0.62
USP53-203ENST00000507597 EHD3Q9NZN3 535 aa18.9■□□□□ 0.62
USP53-203ENST00000507597 PCDHA9Q9Y5H5 950 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms