RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 VN1R5Q7Z5H4 357 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 FAM47BQ8NA70 645 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 ZFP62Q8NB50 900 aaPredicted RBP13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 FBF1Q8TES7 1133 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 ART5Q96L15 291 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 SGCZQ96LD1 299 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 ATOH8Q96SQ7 321 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 VKORC1Q9BQB6 163 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 PELOQ9BRX2 385 aaKnown RBP13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 ALOXE3Q9BYJ1 711 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 UNKQ9C0B0 810 aaKnown RBP13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.44□□□□□ -0.266e-6■□□□□ 8.2
HMGCS1-203ENST00000507004 HPF1Q9NWY4 346 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 MYOTQ9UBF9 498 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 COPS7AQ9UBW8 275 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 PHF11Q9UIL8 331 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 ERVK-11Q9UQG0 969 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 MEMO1Q9Y316 297 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 PCDHGA11Q9Y5H2 935 aa13.44□□□□□ -0.26
HMGCS1-203ENST00000507004 ACOT7O00154 380 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 PEX1O43933 1283 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 PIAS1O75925 651 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 TBX6O95947 436 aaPredicted RBP13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 TNNI3P19429 210 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 ATP5A1P25705 553 aaKnown RBP13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 HTR1EP28566 365 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 MEOX1P50221 254 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 MRPS25P82663 173 aaKnown RBP13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 GUCY2DQ02846 1103 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 ACAP2Q15057 778 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 C10orf62Q5T681 223 aaPredicted RBP13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 DEPDC1Q5TB30 811 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 KHDRBS2Q5VWX1 349 aaKnown RBP13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 TMEM211Q6ICI0 200 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 C8orf74Q6P047 294 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 ARHGAP11AQ6P4F7 1023 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 ZNF227Q86WZ6 799 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 SULF2Q8IWU5 870 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 CPSF7Q8N684 471 aaKnown RBP13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 AMER2Q8N7J2 671 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 ACOT4Q8N9L9 421 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 OR7G3Q8NG95 312 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 ASB15Q8WXK1 588 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 EXT2Q93063 718 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 ESAMQ96AP7 390 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 RGMAQ96B86 450 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 F2RL3Q96RI0 385 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 PSD3Q9NYI0 1048 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 KCMF1Q9P0J7 381 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 MTRF1LQ9UGC7 380 aaKnown RBP13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 SH3BGRL2Q9UJC5 107 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 TMCO1Q9UM00 188 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 CLDN16Q9Y5I7 305 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 NBPF19A0A087WUL8 3843 aa13.43□□□□□ -0.26
HMGCS1-203ENST00000507004 GTF3C1Q12789 2109 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 ARHGAP10A1A4S6 786 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 PRAMEF4O60810 478 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 CLDN14O95500 239 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 PCNAP12004 261 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 COX6B1P14854 86 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 CD22P20273 847 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 CPN2P22792 545 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 PTGS2P35354 604 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 SSR2P43308 183 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 RAP1GDS1P52306 607 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 ALDH18A1P54886 795 aaKnown RBP13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 NDUFAF5Q5TEU4 345 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 PRAMEF9Q5VWM5 478 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 OPN5Q6U736 354 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 ZDHHC24Q6UX98 284 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 SYT10Q6XYQ8 523 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 GK5Q6ZS86 529 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 TAOK1Q7L7X3 1001 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 GDF7Q7Z4P5 450 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 CMC1Q7Z7K0 106 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 DND1Q8IYX4 353 aaKnown RBP13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 CNPY4Q8N129 248 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 ZCCHC7Q8N3Z6 543 aaKnown RBP13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 GOLM1Q8NBJ4 401 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 TANKQ92844 425 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 IGSF5Q9NSI5 407 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 COQ3Q9NZJ6 369 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 TINAGQ9UJW2 476 aa13.42□□□□□ -0.26
HMGCS1-203ENST00000507004 PCNX1Q96RV3 2341 aa13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 C17orf105B2RV13 164 aa13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 UBXN8O00124 270 aa13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 C2P06681 752 aa13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 GFAPP14136 432 aa13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 EPORP19235 508 aa13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 PTX3P26022 381 aaPredicted RBP13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 BUD31P41223 144 aaPredicted RBP13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 SERPINB8P50452 374 aa13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 HNRNPFP52597 415 aaKnown RBP13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 PLIN5Q00G26 463 aa13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 SETDB1Q15047 1291 aa13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 PCBP2Q15366 365 aaKnown RBP eCLIP13.41□□□□□ -0.261e-6■■■■■ 27.4
HMGCS1-203ENST00000507004 OR4C11Q6IEV9 310 aa13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 RTL4Q6ZR62 310 aa13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 RELL1Q8IUW5 271 aa13.41□□□□□ -0.26
HMGCS1-203ENST00000507004 PSD4Q8NDX1 1056 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms