RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 KLC1Q07866 573 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 BST1Q10588 318 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 SLAMF1Q13291 335 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 ELAVL1Q15717 326 aaKnown RBP7.97□□□□□ -1.13
PDGFC-205ENST00000506880 CEBPEQ15744 281 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 FBXO48Q5FWF7 155 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 CCNYL2Q5T2Q4 361 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 IRAK1BP1Q5VVH5 260 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 MLIPQ5VWP3 458 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 PLAG1Q6DJT9 500 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 BORAQ6PGQ7 559 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 SPATA19Q7Z5L4 167 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 UBE3DQ7Z6J8 389 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 MRGPREQ86SM8 312 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 PDSS2Q86YH6 399 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 DND1Q8IYX4 353 aaKnown RBP7.97□□□□□ -1.13
PDGFC-205ENST00000506880 ST13P4Q8IZP2 240 aaPredicted RBP7.97□□□□□ -1.13
PDGFC-205ENST00000506880 ARMC10Q8N2F6 343 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 CLEC1AQ8NC01 280 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 OR14A16Q8NHC5 309 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 M1APQ8TC57 530 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 MOCOSQ96EN8 888 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 C19orf60Q96EN9 201 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 CDK15Q96Q40 435 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 PRPF18Q99633 342 aaKnown RBP7.97□□□□□ -1.13
PDGFC-205ENST00000506880 LPAR4Q99677 370 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 MECRQ9BV79 373 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 VN1R1Q9GZP7 353 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 ZNF700Q9H0M5 742 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 OR51B5Q9H339 312 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 RPF2Q9H7B2 306 aaKnown RBP7.97□□□□□ -1.13
PDGFC-205ENST00000506880 LRTM1Q9HBL6 345 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 HHATLQ9HCP6 504 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 ATP13A2Q9NQ11 1180 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 LANCL2Q9NS86 450 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 GIMAP4Q9NUV9 329 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 ATAD3AQ9NVI7 634 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 NOP53Q9NZM5 478 aaKnown RBP7.97□□□□□ -1.13
PDGFC-205ENST00000506880 TEKT2Q9UIF3 430 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 CFL2Q9Y281 166 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 RAXQ9Y2V3 346 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 CCL27Q9Y4X3 112 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 ASB4Q9Y574 426 aa7.97□□□□□ -1.13
PDGFC-205ENST00000506880 TLN1Q9Y490 2541 aaKnown RBP7.97□□□□□ -1.13
PDGFC-205ENST00000506880 CFAP47Q6ZTR5 3102 aa7.96□□□□□ -1.13
PDGFC-205ENST00000506880 DYTNA2CJ06 578 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 OR6C76A6NM76 312 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 SGK494L7N484 410 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 TAF4O00268 1085 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 FFAR3O14843 346 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 LSM1O15116 133 aaKnown RBP7.96□□□□□ -1.14
PDGFC-205ENST00000506880 GPR42O15529 346 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 PCDH7O60245 1069 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 RDH16O75452 317 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 CEACAM4O75871 244 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 GPR75O95800 540 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 UMODP07911 640 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 PRR35P0CG20 571 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 SLC35E2P0CK97 266 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 CHN1P15882 459 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 DDCP20711 480 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 PRPS1L1P21108 318 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 CPN2P22792 545 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 TPP2P29144 1249 aaPredicted RBP7.96□□□□□ -1.14
PDGFC-205ENST00000506880 MAGEA8P43361 318 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 CCR10P46092 362 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 OR1D4P47884 311 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 CLNS1AP54105 237 aaKnown RBP7.96□□□□□ -1.14
PDGFC-205ENST00000506880 RAB8AP61006 207 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 ERVK-8P63133 956 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 EMX2Q04743 252 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 DDX39BQ13838 428 aaKnown RBP7.96□□□□□ -1.14
PDGFC-205ENST00000506880 ABRAXAS2Q15018 415 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 MLC1Q15049 377 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 KIAA0040Q15053 153 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 NSDHLQ15738 373 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 GSTA3Q16772 222 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 ST3GAL2Q16842 350 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 SPRED3Q2MJR0 410 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 C1orf189Q5VU69 101 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 METTL21CQ5VZV1 264 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 ZNF793Q6ZN11 406 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 CPEB2Q7Z5Q1 589 aaKnown RBP7.96□□□□□ -1.14
PDGFC-205ENST00000506880 CAMKMTQ7Z624 323 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 MARCH9Q86YJ5 346 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 ANKRD42Q8N9B4 389 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 GLB1L3Q8NCI6 653 aaPredicted RBP7.96□□□□□ -1.14
PDGFC-205ENST00000506880 MORN4Q8NDC4 146 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 C17orf47Q8NEP4 570 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.96□□□□□ -1.14
PDGFC-205ENST00000506880 ZCCHC10Q8TBK6 192 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 ACTRT2Q8TDY3 377 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 TM9SF4Q92544 642 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 MAELQ96JY0 434 aaKnown RBP7.96□□□□□ -1.14
PDGFC-205ENST00000506880 SORT1Q99523 831 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 PAIP2Q9BPZ3 127 aaKnown RBP7.96□□□□□ -1.14
PDGFC-205ENST00000506880 AICDAQ9GZX7 198 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 RNF32Q9H0A6 362 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 KLHL31Q9H511 634 aa7.96□□□□□ -1.14
PDGFC-205ENST00000506880 SYNPO2LQ9H987 977 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms