RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 ENDOUP21128 410 aaKnown RBP8.5□□□□□ -1.05
PTPN20-216ENST00000506080 TACR1P25103 407 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 HOXC12P31275 282 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 PEX19P40855 299 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 KCNJ1P48048 391 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 HNRNPFP52597 415 aaKnown RBP8.5□□□□□ -1.05
PTPN20-216ENST00000506080 BTN3A2P78410 334 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 BMPR2Q13873 1038 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 CSHL1Q14406 222 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 SLC10A1Q14973 349 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 TERF2Q15554 542 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 TRIP13Q15645 432 aaPredicted RBP8.5□□□□□ -1.05
PTPN20-216ENST00000506080 TPSAB1Q15661 275 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 C4orf22Q6V702 233 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 RTL4Q6ZR62 310 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 FAM47EQ6ZV65 393 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 CLNKQ7Z7G1 428 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 SCUBE1Q8IWY4 988 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 MYO1HQ8N1T3 1032 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 ANKRD53Q8N9V6 530 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 TMEM52Q8NDY8 209 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 NUDT8Q8WV74 236 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 NEIL2Q969S2 332 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 ARSGQ96EG1 525 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 SMIM10Q96HG1 83 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 SCYL1Q96KG9 808 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 CAPZA3Q96KX2 299 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 TSNARE1Q96NA8 513 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 NDNQ99608 321 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 SH3GL2Q99962 352 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 AICDAQ9GZX7 198 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 TSPY26PQ9H489 355 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 IL1RL2Q9HB29 575 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 SEMA4BQ9NPR2 832 aaPredicted RBP8.5□□□□□ -1.05
PTPN20-216ENST00000506080 PRTFDC1Q9NRG1 225 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 TUBA8Q9NY65 449 aaPredicted RBP8.5□□□□□ -1.05
PTPN20-216ENST00000506080 SPRR3Q9UBC9 169 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 MYOTQ9UBF9 498 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 PPIEQ9UNP9 301 aaKnown RBP8.5□□□□□ -1.05
PTPN20-216ENST00000506080 COMMD10Q9Y6G5 202 aa8.5□□□□□ -1.05
PTPN20-216ENST00000506080 HRNRQ86YZ3 2850 aaPredicted RBP8.5□□□□□ -1.05
PTPN20-216ENST00000506080 TRGV5A0A0B4J1U4 118 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 ZCWPW2A0A1B0GU75 182 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 URADA6NGE7 173 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 HSPB2A8KAH6 182 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 KDM4EB2RXH2 506 aaPredicted RBP8.49□□□□□ -1.05
PTPN20-216ENST00000506080 FAM47E-STBD1D6RA91 191 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 EIF3FO00303 357 aaPredicted RBP8.49□□□□□ -1.05
PTPN20-216ENST00000506080 NRDCO43847 1150 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 SUSD5O60279 629 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 ZNF354AO60765 605 aaPredicted RBP8.49□□□□□ -1.05
PTPN20-216ENST00000506080 LY6G6DO95868 133 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 IFNA16P05015 189 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 HIST1H2AGP0C0S8 130 aaPredicted RBP8.49□□□□□ -1.05
PTPN20-216ENST00000506080 CCL3P10147 92 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 GABRA1P14867 456 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 HIST1H2ADP20671 130 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 SAT1P21673 171 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 PCSK6P29122 969 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 AHRP35869 848 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 PIGAP37287 484 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 VPS41P49754 854 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 RGS4P49798 205 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 ASCL1P50553 236 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 HK2P52789 917 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 WNT3P56703 355 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 CDK16Q00536 496 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 REEP5Q00765 189 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 TIAL1Q01085 375 aaKnown RBP eCLIP8.49□□□□□ -1.05
PTPN20-216ENST00000506080 FOXO1Q12778 655 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 KIF5AQ12840 1032 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 SLC13A2Q13183 592 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 SP140Q13342 867 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 RUNX2Q13950 521 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 DAZAP2Q15038 168 aaPredicted RBP8.49□□□□□ -1.05
PTPN20-216ENST00000506080 RBBP5Q15291 538 aaKnown RBP8.49□□□□□ -1.05
PTPN20-216ENST00000506080 SIX1Q15475 284 aaPredicted RBP8.49□□□□□ -1.05
PTPN20-216ENST00000506080 HSPB2Q16082 182 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 CCNG2Q16589 344 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 DUPD1Q68J44 220 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 PAQR3Q6TCH7 311 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 SEM1Q6ZVN7 128 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 STRA8Q7Z7C7 330 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 KRTAP1-3Q8IUG1 177 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 ZNF321PQ8N8H1 164 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 FAM47BQ8NA70 645 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 NAXEQ8NCW5 288 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 LRRN4CLQ8ND94 238 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 TRPV3Q8NET8 790 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 OR56A3Q8NH54 315 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 LINC01560Q8TB33 94 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 SLC5A11Q8WWX8 675 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 RNASE6Q93091 150 aaKnown RBP8.49□□□□□ -1.05
PTPN20-216ENST00000506080 HIST1H2AHQ96KK5 128 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 HIST1H2AJQ99878 128 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 DESI2Q9BSY9 194 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 H2AFJQ9BTM1 129 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 CLK4Q9HAZ1 481 aaKnown RBP8.49□□□□□ -1.05
PTPN20-216ENST00000506080 NEUROD4Q9HD90 331 aa8.49□□□□□ -1.05
PTPN20-216ENST00000506080 ADAP2Q9NPF8 381 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms