RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 SCN3AQ9NY46 2000 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 CRYBG3Q68DQ2 2970 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 ZNHIT1O43257 154 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 PRKNO60260 465 aaPredicted RBP11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 CDC40O60508 579 aaKnown RBP eCLIP11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 TPOP07202 933 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 CD22P20273 847 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 ATP5A1P25705 553 aaKnown RBP11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 CRABP2P29373 138 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 SSTR2P30874 369 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 STX2P32856 288 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 RFC3P40938 356 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 PLTPP55058 493 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 GPX6P59796 221 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 GPR85P60893 370 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 E2F2Q14209 437 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 AP5B1Q2VPB7 878 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 KBTBD12Q3ZCT8 623 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 CMPK2Q5EBM0 449 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 TMEM211Q6ICI0 200 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 ADNP2Q6IQ32 1131 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 MED27Q6P2C8 311 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 ARHGAP11AQ6P4F7 1023 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 IL20RBQ6UXL0 311 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 C3P1Q6ZMU1 363 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 RGS9BPQ6ZS82 235 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 ISCA2Q86U28 154 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 LAS2Q8IYD9 372 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 PPM1NQ8N819 430 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 ACOT4Q8N9L9 421 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 PSD4Q8NDX1 1056 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 OR5L2Q8NGL0 311 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 ZNF473Q8WTR7 871 aaKnown RBP11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 PTPMT1Q8WUK0 201 aaPredicted RBP11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 ZNF592Q92610 1267 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 EXT2Q93063 718 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 CMTM7Q96FZ5 175 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 MS4A8Q9BY19 250 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 RAB17Q9H0T7 212 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 ALG9Q9H6U8 611 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 GRHL1Q9NZI5 618 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 NUDT4Q9NZJ9 180 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 OPTCQ9UBM4 332 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 ADGRE2Q9UHX3 823 aa11.21□□□□□ -0.61
PDLIM7-214ENST00000505746 MYO9AB2RTY4 2548 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 ZGRF1Q86YA3 2104 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 ITPR2Q14571 2701 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 TMEM200CA6NKL6 621 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 C17orf105B2RV13 164 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 SUPT3HB4E1H0 165 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 K7EPI3 171 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 ACOT7O00154 380 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 WWP2O00308 870 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 ADAM10O14672 748 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 KERAO60938 352 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 SUPT3HO75486 399 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 TGFB1P01137 390 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 C1QAP02745 245 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 LTA4HP09960 611 aaKnown RBP11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 SLC35E2BP0CK96 405 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 PCNAP12004 261 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 EPORP19235 508 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 HIST1H1TP22492 207 aaPredicted RBP11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 MAGEA4P43358 317 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 ETF1P62495 437 aaKnown RBP11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 PLGLB1Q02325 96 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 PCDH1Q08174 1060 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 C2orf54Q08AI8 447 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 BIKQ13323 160 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 NAB1Q13506 487 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 SLMAPQ14BN4 828 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 CDSNQ15517 529 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 ZNF793Q6ZN11 406 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 C16orf47Q6ZP98 133 aaPredicted RBP11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 NCCRP1Q6ZVX7 275 aaPredicted RBP11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 CCDC91Q7Z6B0 441 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 UBE3DQ7Z6J8 389 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 CD163Q86VB7 1156 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 CCDC25Q86WR0 208 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 OR8K3Q8NH51 312 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 SDCCAG3Q96C92 435 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 LURAP1Q96LR2 239 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 RASL10BQ96S79 203 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 MAPKAP1Q9BPZ7 522 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 SPOCK3Q9BQ16 436 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 CENPKQ9BS16 269 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 TRIM8Q9BZR9 551 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 OR8D2Q9GZM6 311 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 LIN28AQ9H9Z2 209 aaKnown RBP11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 PLSCR2Q9NRY7 297 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 MS4A12Q9NXJ0 267 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 COPS7AQ9UBW8 275 aa11.2□□□□□ -0.62
PDLIM7-214ENST00000505746 SCN2AQ99250 2005 aa11.19□□□□□ -0.62
PDLIM7-214ENST00000505746 CACNA1DQ01668 2161 aa11.19□□□□□ -0.62
PDLIM7-214ENST00000505746 MYOCOSA0A1B0GUC4 107 aa11.19□□□□□ -0.62
PDLIM7-214ENST00000505746 SYCE1LA8MT33 242 aa11.19□□□□□ -0.62
PDLIM7-214ENST00000505746 C19orf84I3L1E1 186 aa11.19□□□□□ -0.62
PDLIM7-214ENST00000505746 UBXN8O00124 270 aa11.19□□□□□ -0.62
PDLIM7-214ENST00000505746 RTCAO00442 366 aaKnown RBP11.19□□□□□ -0.62
PDLIM7-214ENST00000505746 DYRK3O43781 588 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms