RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 TMEM9BQ9NQ34 198 aa9.62□□□□□ -0.87
DDX41-203ENST00000504781 TAS2R9Q9NYW1 312 aa9.62□□□□□ -0.87
DDX41-203ENST00000504781 SLC25A37Q9NYZ2 338 aa9.62□□□□□ -0.87
DDX41-203ENST00000504781 KCMF1Q9P0J7 381 aa9.62□□□□□ -0.87
DDX41-203ENST00000504781 ACTR3BQ9P1U1 418 aa9.62□□□□□ -0.87
DDX41-203ENST00000504781 PDP2Q9P2J9 529 aa9.62□□□□□ -0.87
DDX41-203ENST00000504781 ZNF282Q9UDV7 671 aaPredicted RBP9.62□□□□□ -0.87
DDX41-203ENST00000504781 VPS4AQ9UN37 437 aa9.62□□□□□ -0.87
DDX41-203ENST00000504781 PCDHB3Q9Y5E6 796 aa9.62□□□□□ -0.87
DDX41-203ENST00000504781 IGHV5-51A0A0C4DH38 117 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 A0A1W2PR48 441 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 LNP1A1A4G5 178 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 TM4SF5O14894 197 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 SIGLEC6O43699 453 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 PRAMEF10O60809 474 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 ENTPD5O75356 428 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 GMNNO75496 209 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 CPSF4O95639 269 aaKnown RBP9.61□□□□□ -0.87
DDX41-203ENST00000504781 EIF2S1P05198 315 aaKnown RBP9.61□□□□□ -0.87
DDX41-203ENST00000504781 ABCB1P08183 1280 aaPredicted RBP9.61□□□□□ -0.87
DDX41-203ENST00000504781 ZNF888P0CJ79 500 aaPredicted RBP9.61□□□□□ -0.87
DDX41-203ENST00000504781 UMPSP11172 480 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 HOXB3P14651 431 aaPredicted RBP9.61□□□□□ -0.87
DDX41-203ENST00000504781 HOXB9P17482 250 aaPredicted RBP9.61□□□□□ -0.87
DDX41-203ENST00000504781 MPIP34949 423 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 GCKP35557 465 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 MAGEA8P43361 318 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 GABRA4P48169 554 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 NOVA1P51513 510 aaKnown RBP9.61□□□□□ -0.87
DDX41-203ENST00000504781 MANFP55145 182 aaKnown RBP9.61□□□□□ -0.87
DDX41-203ENST00000504781 VSX2P58304 361 aaPredicted RBP9.61□□□□□ -0.87
DDX41-203ENST00000504781 RAB8AP61006 207 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 AP2B1P63010 937 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 ABHD18Q0P651 414 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 FXNQ16595 210 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 TMTC4Q5T4D3 741 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 NDUFAF5Q5TEU4 345 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 ZFP1Q6P2D0 407 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 ZNF793Q6ZN11 406 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 FAM92BQ6ZTR7 304 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 PRSS42Q7Z5A4 293 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 SERPINA11Q86U17 422 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 GATAD2AQ86YP4 633 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 EFCAB3Q8N7B9 438 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 ENDOVQ8N8Q3 282 aaKnown RBP9.61□□□□□ -0.87
DDX41-203ENST00000504781 AMER3Q8N944 861 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 C7orf57Q8NEG2 295 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 OR52E4Q8NGH9 312 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 PSMA8Q8TAA3 256 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 ZBED6CLQ96FA7 236 aaPredicted RBP9.61□□□□□ -0.87
DDX41-203ENST00000504781 DUS3LQ96G46 650 aaKnown RBP9.61□□□□□ -0.87
DDX41-203ENST00000504781 SLC45A3Q96JT2 553 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 KCTD14Q9BQ13 255 aaPredicted RBP9.61□□□□□ -0.87
DDX41-203ENST00000504781 SLC39A3Q9BRY0 314 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 INPP5KQ9BT40 448 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 KLHL25Q9H0H3 589 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 RAD21L1Q9H4I0 556 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 ALG2Q9H553 416 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 KAT8Q9H7Z6 458 aaKnown RBP9.61□□□□□ -0.87
DDX41-203ENST00000504781 SLC35C2Q9NQQ7 365 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.61□□□□□ -0.87
DDX41-203ENST00000504781 SERTAD3Q9UJW9 196 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 ANGPTL2Q9UKU9 493 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 SPACA6W5XKT8 324 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 GOLGA4Q13439 2230 aaKnown RBP9.61□□□□□ -0.87
DDX41-203ENST00000504781 CACNA1EQ15878 2313 aa9.61□□□□□ -0.87
DDX41-203ENST00000504781 MN1Q10571 1320 aaPredicted RBP9.6□□□□□ -0.87
DDX41-203ENST00000504781 BLACEA4D250 179 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 FITM1A5D6W6 292 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 AQP12BA6NM10 295 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 A8MUI8 341 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 NVLO15381 856 aaKnown RBP9.6□□□□□ -0.87
DDX41-203ENST00000504781 GALR3O60755 368 aaPredicted RBP9.6□□□□□ -0.87
DDX41-203ENST00000504781 PSMG1O95456 288 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 KRT75O95678 551 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 CKMT1AP12532 417 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 HOXB6P17509 224 aaKnown RBP9.6□□□□□ -0.87
DDX41-203ENST00000504781 ENGP17813 658 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 TCN1P20061 433 aaPredicted RBP9.6□□□□□ -0.87
DDX41-203ENST00000504781 UQCRC2P22695 453 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 BUD31P41223 144 aaPredicted RBP9.6□□□□□ -0.87
DDX41-203ENST00000504781 ALDH9A1P49189 494 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 PPM1FP49593 454 aaPredicted RBP9.6□□□□□ -0.87
DDX41-203ENST00000504781 ARL4DP49703 201 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 GSK3BP49841 420 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 GZMMP51124 257 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 ATXN3P54252 364 aaPredicted RBP9.6□□□□□ -0.87
DDX41-203ENST00000504781 PPP1CAP62136 330 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 PLIN5Q00G26 463 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 RHDQ02161 417 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 CFHR1Q03591 330 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 VAC14Q08AM6 782 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 BIKQ13323 160 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 SLC14A1Q13336 389 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 RUNX2Q13950 521 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 FLOT2Q14254 428 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 GRM7Q14831 915 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 CEBPEQ15744 281 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 SNCBQ16143 134 aa9.6□□□□□ -0.87
DDX41-203ENST00000504781 MPEG1Q2M385 716 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms