RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 RGS14O43566 566 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 TMPRSS11DO60235 418 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 RSL1D1O76021 490 aaKnown RBP11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 KLK1P06870 262 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 HEXBP07686 556 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 FURINP09958 794 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 FAM58BPP0C7Q3 252 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 TPP2P29144 1249 aaPredicted RBP11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 RPL14P50914 215 aaKnown RBP11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 HMGCS1Q01581 520 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 RHAGQ02094 409 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 IMPG1Q17R60 797 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 SPIN4Q56A73 249 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 CCNYL2Q5T2Q4 361 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 GALNT18Q6P9A2 607 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 QSOX2Q6ZRP7 698 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 Q6ZSR9 355 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 PPP1R32Q7Z5V6 425 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 GPR180Q86V85 440 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 C1orf52Q8N6N3 182 aaKnown RBP11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 ZNF781Q8N8C0 355 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 AGR3Q8TD06 166 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 TWIST2Q8WVJ9 160 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 DYDC1Q8WWB3 177 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 THAP4Q8WY91 577 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 C11orf24Q96F05 449 aaPredicted RBP11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 CATSPER2Q96P56 530 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 VN1R1Q9GZP7 353 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 PRORYQ9H606 182 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 PFDN4Q9NQP4 134 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 MKL2Q9ULH7 1088 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 MRPS33Q9Y291 106 aaKnown RBP11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 MMACHCQ9Y4U1 282 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 ASB4Q9Y574 426 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 SPACA6W5XKT8 324 aa11.21□□□□□ -0.61
PDLIM5-208ENST00000504489 A0A1W2PQ72 361 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 ARHGAP10A1A4S6 786 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 CDC14CA4D256 554 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 CLDN4O14493 209 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 PROM1O43490 865 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 PRMT3O60678 531 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 B4GALT2O60909 372 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 ALOX12BO75342 701 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 GBAP04062 536 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 LINC00032P0C843 101 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 PRKAR1AP10644 381 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 CPN2P22792 545 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 OTX2P32243 289 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 EFNA3P52797 238 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 HNRNPH2P55795 449 aaKnown RBP11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 HSD17B7P56937 341 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 TRA2BP62995 288 aaKnown RBP11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 CXADRP78310 365 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 RAE1P78406 368 aaKnown RBP11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 OCRLQ01968 901 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 ACSM2AQ08AH3 577 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 MINDY4Q4G0A6 757 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 XKR7Q5GH72 579 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 SPDYAQ5MJ70 313 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 MFSD4BQ5TF39 518 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 ACSM2BQ68CK6 577 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 TMEM205Q6UW68 189 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 ZNF595Q8IYB9 648 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 ARFGAP2Q8N6H7 521 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 FAM76AQ8TAV0 307 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 LRRC8CQ8TDW0 803 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 APIPQ96GX9 242 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 VPS50Q96JG6 964 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 RBCK1Q9BYM8 510 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 PRDM9Q9NQV7 894 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 MCM8Q9UJA3 840 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 FBXW2Q9UKT8 454 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 POLHQ9Y253 713 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 ATG4BQ9Y4P1 393 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 PTGDR2Q9Y5Y4 395 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 HS3ST3B1Q9Y662 390 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 LAMA5O15230 3695 aa11.2□□□□□ -0.62
PDLIM5-208ENST00000504489 LOC102723996A0A087X1L8 192 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 A0A1W2PR48 441 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 OR2W5A6NFC9 320 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 PEX12O00623 359 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 SOCS6O14544 535 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 PIP5K1BO14986 540 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 CTNSO60931 367 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 GUCY1B2O75343 617 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 CDC123O75794 336 aaPredicted RBP11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 TLX1P31314 330 aaPredicted RBP11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 TIA1P31483 386 aaKnown RBP eCLIP11.19□□□□□ -0.624e-7■■■■■ 27.1
PDLIM5-208ENST00000504489 BUD31P41223 144 aaPredicted RBP11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 GSTM5P46439 218 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 MAPK12P53778 367 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 BTG2P78543 158 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 TNFRSF17Q02223 184 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 BTKQ06187 659 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 LAPTM4AQ15012 233 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 KIAA0040Q15053 153 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 ATP1A1-AS1Q5TC04 95 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 KIRREL2Q6UWL6 708 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 GPR155Q7Z3F1 870 aa11.19□□□□□ -0.62
PDLIM5-208ENST00000504489 MRGPREQ86SM8 312 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms