RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 CAPSLQ8WWF8 208 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 SUSD6Q92537 303 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 P2RX5Q93086 422 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 ERLEC1Q96DZ1 483 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 CPB2Q96IY4 423 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 MTERF1Q99551 399 aaKnown RBP4.89□□□□□ -1.63
NIPBL-204ENST00000504430 ZMYND12Q9H0C1 365 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 SLITRK6Q9H5Y7 841 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 CISD1Q9NZ45 108 aaKnown RBP4.89□□□□□ -1.63
NIPBL-204ENST00000504430 PITPNC1Q9UKF7 332 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 ADAM28Q9UKQ2 775 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 GRIN2DO15399 1336 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 TULP2O00295 520 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 INPPL1O15357 1258 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 NBR2O15453 112 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 PLA2G1BP04054 148 aaKnown RBP4.89□□□□□ -1.63
NIPBL-204ENST00000504430 SP9P0CG40 484 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 RPL13P26373 211 aaKnown RBP4.89□□□□□ -1.63
NIPBL-204ENST00000504430 IL12BP29460 328 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 CYLC1P35663 651 aaPredicted RBP4.89□□□□□ -1.63
NIPBL-204ENST00000504430 CFHR2P36980 270 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 TNFRSF4P43489 277 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 LHX1P48742 406 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 ADPRHP54922 357 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 PPP2CBP62714 309 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 PPP2CAP67775 309 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 STX3Q13277 289 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 CPSF6Q16630 551 aaKnown RBP eCLIP4.89□□□□□ -1.63
NIPBL-204ENST00000504430 ESCO2Q56NI9 601 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 FAM69BQ5VUD6 431 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 B3GNTL1Q67FW5 361 aaPredicted RBP4.89□□□□□ -1.63
NIPBL-204ENST00000504430 FAM166AQ6J272 317 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 CEP85Q6P2H3 762 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 C3P1Q6ZMU1 363 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 LEKR1Q6ZMV7 388 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 POLNQ7Z5Q5 900 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 NAGSQ8N159 534 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 THEM5Q8N1Q8 247 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 MARCH1Q8TCQ1 289 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 CMTM5Q96DZ9 223 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 CXorf58Q96LI9 332 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 SLITRK1Q96PX8 696 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 SH3GL3Q99963 347 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 HAUS8Q9BT25 410 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 NAT9Q9BTE0 207 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 BEX2Q9BXY8 128 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 GSDMCQ9BYG8 508 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 P2RX2Q9UBL9 471 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 KLF2Q9Y5W3 355 aaPredicted RBP4.89□□□□□ -1.63
NIPBL-204ENST00000504430 DUSP10Q9Y6W6 482 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 E5RJQ4 531 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 SNAI2O43623 268 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 TRIAP1O43715 76 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 H6PDO95479 791 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 OR2B6P58173 313 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 ITGADQ13349 1161 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 KNOP1Q1ED39 458 aaKnown RBP4.89□□□□□ -1.63
NIPBL-204ENST00000504430 MICBQ29980 383 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 SBK1Q52WX2 424 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.89□□□□□ -1.63
NIPBL-204ENST00000504430 OR2L3Q8NG85 312 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 OR1L6Q8NGR2 347 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 ZNF419Q96HQ0 510 aaPredicted RBP4.89□□□□□ -1.63
NIPBL-204ENST00000504430 FEM1AQ9BSK4 669 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 CCM2Q9BSQ5 444 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 IDI2Q9BXS1 227 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 SFXN1Q9H9B4 322 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 TUBA8Q9NY65 449 aaPredicted RBP4.89□□□□□ -1.63
NIPBL-204ENST00000504430 FAM30AQ9NZY2 134 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 TMED7Q9Y3B3 224 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 ZNF644Q9H582 1327 aaPredicted RBP4.89□□□□□ -1.63
NIPBL-204ENST00000504430 DISP3Q9P2K9 1392 aa4.89□□□□□ -1.63
NIPBL-204ENST00000504430 FOXN1O15353 648 aa4.88□□□□□ -1.63
NIPBL-204ENST00000504430 HCN1O60741 890 aa4.88□□□□□ -1.63
NIPBL-204ENST00000504430 PRNPP04156 253 aa4.88□□□□□ -1.63
NIPBL-204ENST00000504430 PNMA6AP0CW24 399 aaPredicted RBP4.88□□□□□ -1.63
NIPBL-204ENST00000504430 VSIG8P0DPA2 414 aa4.88□□□□□ -1.63
NIPBL-204ENST00000504430 ZNF18P17022 549 aa4.88□□□□□ -1.63
NIPBL-204ENST00000504430 CFL1P23528 166 aaKnown RBP4.88□□□□□ -1.63
NIPBL-204ENST00000504430 PSMB6P28072 239 aa4.88□□□□□ -1.63
NIPBL-204ENST00000504430 LAP3P28838 519 aa4.88□□□□□ -1.63
NIPBL-204ENST00000504430 ERFP50548 548 aa4.88□□□□□ -1.63
NIPBL-204ENST00000504430 RAD23BP54727 409 aa4.88□□□□□ -1.63
NIPBL-204ENST00000504430 ACTBP60709 375 aa4.88□□□□□ -1.63
NIPBL-204ENST00000504430 ACTA2P62736 377 aa4.88□□□□□ -1.63
NIPBL-204ENST00000504430 ACTG1P63261 375 aa4.88□□□□□ -1.63
NIPBL-204ENST00000504430 ACTG2P63267 376 aa4.88□□□□□ -1.63
NIPBL-204ENST00000504430 ACTC1P68032 377 aa4.88□□□□□ -1.63
NIPBL-204ENST00000504430 ACTA1P68133 377 aa4.88□□□□□ -1.63
NIPBL-204ENST00000504430 NFATC2Q13469 925 aa4.88□□□□□ -1.63
NIPBL-204ENST00000504430 KEAP1Q14145 624 aa4.88□□□□□ -1.63
NIPBL-204ENST00000504430 GK3PQ14409 553 aa4.88□□□□□ -1.63
NIPBL-204ENST00000504430 SOWAHAQ2M3V2 549 aa4.88□□□□□ -1.63
NIPBL-204ENST00000504430 CTSL3PQ5NE16 218 aa4.88□□□□□ -1.63
NIPBL-204ENST00000504430 LRRC74BQ6ZQY2 392 aa4.88□□□□□ -1.63
NIPBL-204ENST00000504430 Q6ZUG5 572 aa4.88□□□□□ -1.63
NIPBL-204ENST00000504430 PTF1AQ7RTS3 328 aa4.88□□□□□ -1.63
NIPBL-204ENST00000504430 ABHD12BQ7Z5M8 362 aaPredicted RBP4.88□□□□□ -1.63
NIPBL-204ENST00000504430 SERPINA9Q86WD7 417 aa4.88□□□□□ -1.63
NIPBL-204ENST00000504430 MCOLN2Q8IZK6 566 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms