RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 EPORP19235 508 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 CHI3L1P36222 383 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-208ENST00000504387 MAP4K2Q12851 820 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 MAB21L1Q13394 359 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 FBXO43Q4G163 708 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 XKR6Q5GH73 641 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 BHLHB9Q6PI77 547 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 UNC5DQ6UXZ4 953 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 CCDC149Q6ZUS6 474 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 TSPAN33Q86UF1 283 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 RNF130Q86XS8 419 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 VRK3Q8IV63 474 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 KLHDC8BQ8IXV7 354 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 REPS1Q96D71 796 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 FBXO44Q9H4M3 255 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 POPDC3Q9HBV1 291 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 MCCC2Q9HCC0 563 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 CSNK1G1Q9HCP0 422 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 RDH8Q9NYR8 311 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 C5AR2Q9P296 337 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 EIF3KQ9UBQ5 218 aaKnown RBP7.29□□□□□ -1.24
NEDD9-208ENST00000504387 TLR6Q9Y2C9 796 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 TLR4O00206 839 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 LANCL1O43813 399 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 GCM2O75603 506 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-208ENST00000504387 C6orf47O95873 294 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 ANXA5P08758 320 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 ANXA4P09525 319 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-208ENST00000504387 ZNF7P17097 686 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-208ENST00000504387 CXCL3P19876 107 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 DRD5P21918 477 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 XPAP23025 273 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-208ENST00000504387 PBLDP30039 288 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-208ENST00000504387 CSTF2P33240 577 aaKnown RBP eCLIP7.29□□□□□ -1.242e-7■■■■□ 21.4
NEDD9-208ENST00000504387 PTGER3P43115 390 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 ACVR1Q04771 509 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 TARDBPQ13148 414 aaKnown RBP eCLIP7.29□□□□□ -1.24
NEDD9-208ENST00000504387 MICAQ29983 383 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 CPTPQ5TA50 214 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 SERPINA13PQ6UXR4 307 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 CASP12Q6UXS9 341 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 CFAP77Q6ZQR2 320 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 ZNF367Q7RTV3 350 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 KANSL1Q7Z3B3 1105 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 TMEM145Q8NBT3 493 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 HJURPQ8NCD3 748 aaPredicted RBP7.29□□□□□ -1.24
NEDD9-208ENST00000504387 OR11H4Q8NGC9 324 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 GDF15Q99988 308 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 TTTY10Q9BZA0 68 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 ASAH2Q9NR71 780 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 KLK4Q9Y5K2 254 aa7.29□□□□□ -1.24
NEDD9-208ENST00000504387 KNL1Q8NG31 2342 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 HYAL3O43820 417 aaPredicted RBP7.28□□□□□ -1.24
NEDD9-208ENST00000504387 GATBO75879 557 aaKnown RBP7.28□□□□□ -1.24
NEDD9-208ENST00000504387 ETHE1O95571 254 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 MSL3P1P0C860 447 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 PRKAR1AP10644 381 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 ICAM2P13598 275 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 HOXB8P17481 243 aaPredicted RBP7.28□□□□□ -1.24
NEDD9-208ENST00000504387 POLR2CP19387 275 aaPredicted RBP7.28□□□□□ -1.24
NEDD9-208ENST00000504387 HOXD9P28356 352 aaPredicted RBP7.28□□□□□ -1.24
NEDD9-208ENST00000504387 HOXC13P31276 330 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 VIPR1P32241 457 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 ATP6V1E1P36543 226 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 ETV5P41161 510 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 ETV1P50549 477 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 CRYZQ08257 329 aaKnown RBP7.28□□□□□ -1.24
NEDD9-208ENST00000504387 RBBP4Q09028 425 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 PLD1Q13393 1074 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 ARHGEF6Q15052 776 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 RGNQ15493 299 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 IDNKQ5T6J7 187 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 FAM171BQ6P995 826 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 USP45Q70EL2 814 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 ZBTB2Q8N680 514 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 C11orf65Q8NCR3 313 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.28□□□□□ -1.24
NEDD9-208ENST00000504387 CREB3L4Q8TEY5 395 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 KAT2AQ92830 837 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 ARMC5Q96C12 935 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 ZFP3Q96NJ6 502 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 PITX2Q99697 317 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 WFDC6Q9BQY6 131 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 GPR62Q9BZJ7 368 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 MED28Q9H204 178 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 NUDT15Q9NV35 164 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 NPAP1Q9NZP6 1156 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 ERVW-1Q9UQF0 538 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 POFUT2Q9Y2G5 429 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 SPEGQ15772 3267 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 SPTBP11277 2137 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 TRBC2A0A5B9 178 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 OR2AG2A6NM03 316 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 TNFRSF10BO14763 440 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 CFDP00746 253 aaPredicted RBP7.28□□□□□ -1.24
NEDD9-208ENST00000504387 HIST1H2AGP0C0S8 130 aaPredicted RBP7.28□□□□□ -1.24
NEDD9-208ENST00000504387 CELP19835 753 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 HIST1H2ADP20671 130 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 DGKAP23743 735 aa7.28□□□□□ -1.24
NEDD9-208ENST00000504387 PKLRP30613 574 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms