RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 SMPD4Q9NXE4 827 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 DPP3Q9NY33 737 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ACTR10Q9NZ32 417 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SPASTQ9UBP0 616 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 TNPO3Q9Y5L0 923 aaKnown RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 AUP1Q9Y679 476 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 A0A1W2PPL8 197 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 MPTX1A8MV57 137 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 G3V2T6 193 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 NEMP1O14524 444 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 PCDH17O14917 1159 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 AZIN1O14977 448 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SLC16A5O15375 505 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ST8SIA5O15466 376 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 FAM20BO75063 409 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ULK1O75385 1050 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 HRGP04196 525 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 MPZP25189 248 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 AGTR1P30556 359 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 EVI2BP34910 448 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 LTBRP36941 435 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 MEOX2P50222 304 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 CDH8P55286 799 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 AP3S2P59780 193 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 CDC42P60953 191 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ERVK-8P63133 956 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 MRPS10P82664 201 aaKnown RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SLAMF1Q13291 335 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 CDK5R2Q13319 367 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 LAPTM5Q13571 262 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 DGCR6Q14129 220 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ARHGAP19Q14CB8 494 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 IMPG1Q17R60 797 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 TIGD6Q17RP2 521 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ATG9BQ674R7 924 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 GPIHBP1Q8IV16 184 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SLITRK4Q8IW52 837 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SVBPQ8N300 66 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 EFHBQ8N7U6 833 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 PROKR2Q8NFJ6 384 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SHKBP1Q8TBC3 707 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SH3RF2Q8TEC5 729 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 HTR3CQ8WXA8 447 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 OR2A14Q96R47 310 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 P2RY13Q9BPV8 354 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 YIPF4Q9BSR8 244 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 MED18Q9BUE0 208 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 HDHD5Q9BXW7 423 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 MRPL4Q9BYD3 311 aaKnown RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ACTR8Q9H981 624 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 EQTNQ9NQ60 294 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ERVK-18Q9QC07 812 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 XPR1Q9UBH6 696 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 LIPT1Q9Y234 373 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 AAR2Q9Y312 384 aaKnown RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 HELZ2Q9BYK8 2649 aaKnown RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 A0A0J9YYE9 177 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 LOC100130705A0A1B0GUX0 176 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 LOC390937A0A1W2PQ73 354 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 DBX1A6NMT0 343 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 G3V2L1 256 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 H7BY64 318 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SGK494L7N484 410 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 NME4O00746 187 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 TPP1O14773 563 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 CASKO14936 926 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 CASC3O15234 703 aaKnown RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 CRCPO75575 148 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 FGF18O76093 207 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SBK2P0C263 348 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ZSCAN5DPP0CG00 497 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 CYP2A6P11509 494 aaPredicted RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SRCP12931 536 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 GPD1P21695 349 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 LIG4P49917 911 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 CDH4P55283 916 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 CTBP2P56545 445 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SESN2P58004 480 aaPredicted RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SMIM11AP58511 58 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 GBE1Q04446 702 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 TDGQ13569 410 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SNAPC1Q16533 368 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 TATDN3Q17R31 274 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 TMEM52BQ4KMG9 183 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SLC35D3Q5M8T2 416 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 SLC22A10Q63ZE4 541 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 GJB7Q6PEY0 223 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 UTS2BQ765I0 119 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ZNF605Q86T29 641 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 CCDC71Q8IV32 467 aaPredicted RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 PARP16Q8N5Y8 322 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 RTL3Q8N8U3 475 aaKnown RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 C17orf47Q8NEP4 570 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 UBASH3BQ8TF42 649 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 TCTEX1D2Q8WW35 142 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 CPNE4Q96A23 557 aaPredicted RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 FAM162AQ96A26 154 aa2.66□□□□□ -1.98
NEDD4-204ENST00000503468 ELF4Q99607 663 aaPredicted RBP2.66□□□□□ -1.98
NEDD4-204ENST00000503468 MGLLQ99685 303 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms