RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 JMJD6Q6NYC1 403 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 PAPD4Q6PIY7 484 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 EXOC3L1Q86VI1 746 aa17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 NUDT13Q86X67 352 aa17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 PTRH1Q86Y79 214 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 PSMF1Q92530 271 aa17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 AGAP4Q96P64 663 aa17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 GATA5Q9BWX5 397 aaPredicted RBP17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 LYARQ9NX58 379 aaKnown RBP17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 AHSPQ9NZD4 102 aa17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 PHF11Q9UIL8 331 aa17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 ADAM29Q9UKF5 820 aa17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 FBXW2Q9UKT8 454 aa17.1■□□□□ 0.33
PDLIM7-209ENST00000503346 TLN1Q9Y490 2541 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 TGFBR3LH3BV60 316 aa17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 TMPRSS11DO60235 418 aa17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 DPM1O60762 260 aa17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 ULK1O75385 1050 aa17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 CELA2AP08217 269 aa17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 CPN2P22792 545 aa17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 ALDH3A1P30838 453 aa17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 ETV4P43268 484 aa17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 KLRB1Q12918 225 aa17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 CSTF3Q12996 717 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 SLC13A2Q13183 592 aa17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 IGFL2Q6UWQ7 119 aa17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 IGFL3Q6UXB1 125 aa17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 GPR180Q86V85 440 aa17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 METTL4Q8N3J2 472 aa17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 M1APQ8TC57 530 aa17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 BRIX1Q8TDN6 353 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 TRMOQ9BU70 441 aa17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 MRPL1Q9BYD6 325 aaKnown RBP17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 MMP25Q9NPA2 562 aa17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 NMRK1Q9NWW6 199 aa17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 ANAPC2Q9UJX6 822 aa17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 SLC12A4Q9UP95 1085 aa17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 ASB4Q9Y574 426 aa17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 ACTL7BQ9Y614 415 aa17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 NUP210LQ5VU65 1888 aa17.09■□□□□ 0.33
PDLIM7-209ENST00000503346 SERTM1A2A2V5 107 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 SAGE2PA6NJ88 616 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 CTIFO43310 598 aaKnown RBP17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 SUV39H1O43463 412 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 FAM58BPP0C7Q3 252 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 ITGAMP11215 1152 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 SOX11P35716 441 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 HTR6P50406 440 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 HNRNPH2P55795 449 aaKnown RBP17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 SLC26A5P58743 744 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 TNFRSF17Q02223 184 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 TBL3Q12788 808 aaKnown RBP17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 BTBD16Q32M84 506 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 CRB2Q5IJ48 1285 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 CYP20A1Q6UW02 462 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 PAGE2Q7Z2X7 111 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 EFCAB3Q8N7B9 438 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 AMER2Q8N7J2 671 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 GBP7Q8N8V2 638 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 TEX19Q8NA77 164 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 C7orf57Q8NEG2 295 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 TM9SF4Q92544 642 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 CNDP1Q96KN2 507 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 KCNA7Q96RP8 456 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 HBEGFQ99075 208 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 CENPHQ9H3R5 247 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 VPS29Q9UBQ0 182 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 ATG4BQ9Y4P1 393 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 TIMM22Q9Y584 194 aa17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 HEMK1Q9Y5R4 338 aaPredicted RBP17.08■□□□□ 0.32
PDLIM7-209ENST00000503346 PROM1O43490 865 aa17.07■□□□□ 0.32
PDLIM7-209ENST00000503346 TLX1P31314 330 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-209ENST00000503346 BUD31P41223 144 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-209ENST00000503346 FOXA1P55317 472 aa17.07■□□□□ 0.32
PDLIM7-209ENST00000503346 GALNT1Q10472 559 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-209ENST00000503346 TERF2Q15554 542 aa17.07■□□□□ 0.32
PDLIM7-209ENST00000503346 ISLR2Q6UXK2 745 aa17.07■□□□□ 0.32
PDLIM7-209ENST00000503346 CLNKQ7Z7G1 428 aa17.07■□□□□ 0.32
PDLIM7-209ENST00000503346 RBMXL3Q8N7X1 1067 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-209ENST00000503346 LMF1Q96S06 567 aa17.07■□□□□ 0.32
PDLIM7-209ENST00000503346 MECRQ9BV79 373 aa17.07■□□□□ 0.32
PDLIM7-209ENST00000503346 ACPTQ9BZG2 426 aa17.07■□□□□ 0.32
PDLIM7-209ENST00000503346 RPF2Q9H7B2 306 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-209ENST00000503346 ZBTB20Q9HC78 741 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-209ENST00000503346 CFAP46Q8IYW2 2715 aa17.07■□□□□ 0.32
PDLIM7-209ENST00000503346 COL6A6A6NMZ7 2263 aa17.07■□□□□ 0.32
PDLIM7-209ENST00000503346 A0A1W2PR48 441 aa17.06■□□□□ 0.32
PDLIM7-209ENST00000503346 NPHS1O60500 1241 aa17.06■□□□□ 0.32
PDLIM7-209ENST00000503346 GBAP04062 536 aa17.06■□□□□ 0.32
PDLIM7-209ENST00000503346 KLK1P06870 262 aa17.06■□□□□ 0.32
PDLIM7-209ENST00000503346 BPGMP07738 259 aa17.06■□□□□ 0.32
PDLIM7-209ENST00000503346 MYZAPP0CAP1 466 aa17.06■□□□□ 0.32
PDLIM7-209ENST00000503346 CHN1P15882 459 aa17.06■□□□□ 0.32
PDLIM7-209ENST00000503346 TPP2P29144 1249 aaPredicted RBP17.06■□□□□ 0.32
PDLIM7-209ENST00000503346 MFAP5Q13361 173 aa17.06■□□□□ 0.32
PDLIM7-209ENST00000503346 SERTAD2Q14140 314 aa17.06■□□□□ 0.32
PDLIM7-209ENST00000503346 C18orf63Q68DL7 685 aa17.06■□□□□ 0.32
PDLIM7-209ENST00000503346 H3F3CQ6NXT2 135 aa17.06■□□□□ 0.32
PDLIM7-209ENST00000503346 COMMD6Q7Z4G1 85 aa17.06■□□□□ 0.32
PDLIM7-209ENST00000503346 NFAM1Q8NET5 270 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms