RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 UTP15Q8TED0 518 aaKnown RBP20.87■□□□□ 0.93
PTPN13-205ENST00000502971 DNASE2BQ8WZ79 361 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 VPS50Q96JG6 964 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 OSBPL11Q9BXB4 747 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 SLC35C2Q9NQQ7 365 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 BATF3Q9NR55 127 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 C1GALT1Q9NS00 363 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 DNAJB9Q9UBS3 223 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 ZNF639Q9UID6 485 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 UTS2RQ9UKP6 389 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 BDP1A6H8Y1 2624 aa20.87■□□□□ 0.93
PTPN13-205ENST00000502971 NUP214P35658 2090 aaPredicted RBP20.86■□□□□ 0.93
PTPN13-205ENST00000502971 CEP192Q8TEP8 1941 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 CCDC163A0A0D9SF12 145 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 A0A1W2PR48 441 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 C7orf72A4D263 438 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 MAGEA13PA6NCF6 341 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 TMEM221A6NGB7 291 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 M0R296 226 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 RASAL1O95294 804 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 PDGFBP01127 241 aaPredicted RBP20.86■□□□□ 0.93
PTPN13-205ENST00000502971 CERS1P27544 350 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 LSSP48449 732 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 HNRNPKP61978 463 aaKnown RBP eCLIP20.86■□□□□ 0.93
PTPN13-205ENST00000502971 BTN3A2P78410 334 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 MRPS35P82673 323 aaKnown RBP20.86■□□□□ 0.93
PTPN13-205ENST00000502971 SIM2Q14190 667 aaPredicted RBP20.86■□□□□ 0.93
PTPN13-205ENST00000502971 C16orf72Q14CZ0 275 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 SUZ12Q15022 739 aaKnown RBP20.86■□□□□ 0.93
PTPN13-205ENST00000502971 COX20Q5RI15 118 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 CBLL1Q75N03 491 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 RNF44Q7L0R7 432 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 EIF3MQ7L2H7 374 aaKnown RBP20.86■□□□□ 0.93
PTPN13-205ENST00000502971 RNF130Q86XS8 419 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 OR5AK3PQ8NH89 298 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 PSMA8Q8TAA3 256 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 RSC1A1Q92681 617 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 RERGQ96A58 199 aaPredicted RBP20.86■□□□□ 0.93
PTPN13-205ENST00000502971 EVA1BQ9NVM1 165 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 C5AR2Q9P296 337 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 RAPGEFL1Q9UHV5 662 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 ACSL6Q9UKU0 697 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 ATG4BQ9Y4P1 393 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 AK5Q9Y6K8 562 aa20.86■□□□□ 0.93
PTPN13-205ENST00000502971 MDC1Q14676 2089 aaKnown RBP20.86■□□□□ 0.93
PTPN13-205ENST00000502971 TECTAO75443 2155 aa20.85■□□□□ 0.93
PTPN13-205ENST00000502971 RNF103-CHMP3A0A140T963 221 aa20.85■□□□□ 0.93
PTPN13-205ENST00000502971 SMIM10L1P0DMW3 83 aa20.85■□□□□ 0.93
PTPN13-205ENST00000502971 ETFAP13804 333 aa20.85■□□□□ 0.93
PTPN13-205ENST00000502971 BCKDHBP21953 392 aa20.85■□□□□ 0.93
PTPN13-205ENST00000502971 MANEAQ5SRI9 462 aa20.85■□□□□ 0.93
PTPN13-205ENST00000502971 SAXO2Q658L1 398 aa20.85■□□□□ 0.93
PTPN13-205ENST00000502971 FAM180BQ6P0A1 224 aa20.85■□□□□ 0.93
PTPN13-205ENST00000502971 KLHL35Q6PF15 583 aa20.85■□□□□ 0.93
PTPN13-205ENST00000502971 ZFP28Q8NHY6 868 aa20.85■□□□□ 0.93
PTPN13-205ENST00000502971 NEURL3Q96EH8 262 aa20.85■□□□□ 0.93
PTPN13-205ENST00000502971 SMIM10Q96HG1 83 aa20.85■□□□□ 0.93
PTPN13-205ENST00000502971 DUSP15Q9H1R2 295 aaPredicted RBP20.85■□□□□ 0.93
PTPN13-205ENST00000502971 NTN4Q9HB63 628 aa20.85■□□□□ 0.93
PTPN13-205ENST00000502971 ZSCAN32Q9NX65 697 aa20.85■□□□□ 0.93
PTPN13-205ENST00000502971 FBXW2Q9UKT8 454 aa20.85■□□□□ 0.93
PTPN13-205ENST00000502971 MAP4K5Q9Y4K4 846 aa20.85■□□□□ 0.93
PTPN13-205ENST00000502971 SNX8Q9Y5X2 465 aa20.85■□□□□ 0.93
PTPN13-205ENST00000502971 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.84■□□□□ 0.93
PTPN13-205ENST00000502971 PROM1O43490 865 aa20.84■□□□□ 0.93
PTPN13-205ENST00000502971 ZNF682O95780 498 aa20.84■□□□□ 0.93
PTPN13-205ENST00000502971 ZNF888P0CJ79 500 aaPredicted RBP20.84■□□□□ 0.93
PTPN13-205ENST00000502971 NTSP30990 170 aa20.84■□□□□ 0.93
PTPN13-205ENST00000502971 PRIM2P49643 509 aa20.84■□□□□ 0.93
PTPN13-205ENST00000502971 BLMHQ13867 455 aa20.84■□□□□ 0.93
PTPN13-205ENST00000502971 PDK3Q15120 406 aa20.84■□□□□ 0.93
PTPN13-205ENST00000502971 WDR45BQ5MNZ6 344 aa20.84■□□□□ 0.93
PTPN13-205ENST00000502971 ZNF761Q86XN6 746 aaPredicted RBP20.84■□□□□ 0.93
PTPN13-205ENST00000502971 SLC30A8Q8IWU4 369 aa20.84■□□□□ 0.93
PTPN13-205ENST00000502971 TMEFF1Q8IYR6 380 aa20.84■□□□□ 0.93
PTPN13-205ENST00000502971 ARL14Q8N4G2 192 aa20.84■□□□□ 0.93
PTPN13-205ENST00000502971 ZNF655Q8N720 491 aaPredicted RBP20.84■□□□□ 0.93
PTPN13-205ENST00000502971 UCN3Q969E3 161 aa20.84■□□□□ 0.93
PTPN13-205ENST00000502971 POMT2Q9UKY4 750 aa20.84■□□□□ 0.93
PTPN13-205ENST00000502971 PDLIM1O00151 329 aa20.84■□□□□ 0.93
PTPN13-205ENST00000502971 UPK1AO00322 258 aa20.84■□□□□ 0.93
PTPN13-205ENST00000502971 ZSCAN9O15535 394 aaPredicted RBP20.84■□□□□ 0.93
PTPN13-205ENST00000502971 AIFM1O95831 613 aa20.84■□□□□ 0.93
PTPN13-205ENST00000502971 CST1P01037 141 aa20.84■□□□□ 0.93
PTPN13-205ENST00000502971 ZNF23P17027 643 aa20.84■□□□□ 0.93
PTPN13-205ENST00000502971 ZNF10P21506 573 aaPredicted RBP20.84■□□□□ 0.93
PTPN13-205ENST00000502971 MAGEA2P43356 314 aa20.84■□□□□ 0.93
PTPN13-205ENST00000502971 GTF2A1P52655 376 aaPredicted RBP20.84■□□□□ 0.93
PTPN13-205ENST00000502971 MAZP56270 477 aaKnown RBP20.84■□□□□ 0.93
PTPN13-205ENST00000502971 HSPB3Q12988 150 aa20.84■□□□□ 0.93
PTPN13-205ENST00000502971 ZNF630Q2M218 657 aaPredicted RBP20.84■□□□□ 0.93
PTPN13-205ENST00000502971 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.84■□□□□ 0.93
PTPN13-205ENST00000502971 SERINC2Q96SA4 455 aa20.84■□□□□ 0.93
PTPN13-205ENST00000502971 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.84■□□□□ 0.93
PTPN13-205ENST00000502971 KLHL25Q9H0H3 589 aa20.84■□□□□ 0.93
PTPN13-205ENST00000502971 SEMA6CQ9H3T2 930 aa20.84■□□□□ 0.93
PTPN13-205ENST00000502971 SIRT3Q9NTG7 399 aaPredicted RBP20.84■□□□□ 0.93
PTPN13-205ENST00000502971 H0YGG7 62 aa20.83■□□□□ 0.92
PTPN13-205ENST00000502971 P2RX6O15547 441 aa20.83■□□□□ 0.92
PTPN13-205ENST00000502971 AQP9O43315 295 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms