RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 CH25HO95992 272 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 MT-ND5P03915 603 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 SOX4Q06945 474 aaPredicted RBP16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 TRAM1Q15629 374 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 GPR19Q15760 415 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 SMN1Q16637 294 aaKnown RBP16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 HSF5Q4G112 596 aaPredicted RBP16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 CPZQ66K79 652 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 CHST9Q7L1S5 443 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 TMEM17Q86X19 198 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 POMGNT2Q8NAT1 580 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 COQ8AQ8NI60 647 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 GPR151Q8TDV0 419 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 GTF2H4Q92759 462 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 CXorf40BQ96DE9 158 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 NEURL2Q9BR09 285 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 INPP5KQ9BT40 448 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 OR2AT4A6NND4 320 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 PROM1O43490 865 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 OR1F1O43749 312 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 UQCRC2P22695 453 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 AVPR1BP47901 424 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 NFATC2Q13469 925 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 GTF2IRD2BQ6EKJ0 949 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 ZNF782Q6ZMW2 699 aaPredicted RBP16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 GTF2IRD2Q86UP8 949 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 TICAM1Q8IUC6 712 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 TMEM151AQ8N4L1 468 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 B3GNT7Q8NFL0 401 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 DNASE1L2Q92874 299 aa16.54■□□□□ 0.24
HMGXB3-201ENST00000502717 MYH14Q7Z406 1995 aaKnown RBP16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 BTAF1O14981 1849 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 SNAI1O95863 264 aaPredicted RBP16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 KCNQ1P51787 676 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 UBXN2BQ14CS0 331 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 SF3A2Q15428 464 aaKnown RBP16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 ZNF648Q5T619 568 aaPredicted RBP16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 FAM217AQ8IXS0 508 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 ZNF548Q8NEK5 533 aaPredicted RBP16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 GNPDA2Q8TDQ7 276 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 ZNF583Q96ND8 569 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 OR4K3Q96R72 315 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 TAS2R10Q9NYW0 307 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 METTL21EPA6NDL7 271 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 ACRP10323 421 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 JUPP14923 745 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 ARSAP15289 507 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 PTPN2P17706 415 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 NRIP1P48552 1158 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 C12orf66Q96MD2 445 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 CACNG6Q9BXT2 260 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 RETREG1Q9H6L5 497 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 CCSER2Q9H7U1 834 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 POLMQ9NP87 494 aaPredicted RBP16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 SLC35C2Q9NQQ7 365 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 KLK4Q9Y5K2 254 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 B8ZZF3 427 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 PFKLP17858 780 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 POLR2IP36954 125 aaKnown RBP16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 CSKP41240 450 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 JAZF1Q86VZ6 243 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 UBQLNLQ8IYU4 475 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 PNPLA1Q8N8W4 532 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 FAM83FQ8NEG4 500 aaPredicted RBP16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 CHFRQ96EP1 664 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 LRR1Q96L50 414 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 RANGRFQ9HD47 186 aaPredicted RBP16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 SOHLH2Q9NX45 425 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 POLR1DQ9Y2S0 133 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 UGT2A1Q9Y4X1 527 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 CORINQ9Y5Q5 1042 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 DDX60Q8IY21 1712 aaKnown RBP16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 METTL15A6NJ78 407 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 DUXAA6NLW8 204 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 NUDT14O95848 222 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 NCBP2P52298 156 aaKnown RBP eCLIP16.53■□□□□ 0.248e-8■□□□□ 8.9
HMGXB3-201ENST00000502717 BAIAP2L2Q6UXY1 529 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 GGHQ92820 318 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 OR51I1Q9H343 314 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 SUV39H2Q9H5I1 410 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 USP22Q9UPT9 525 aa16.53■□□□□ 0.24
HMGXB3-201ENST00000502717 OR10H2O60403 315 aa16.52■□□□□ 0.24
HMGXB3-201ENST00000502717 ADAM23O75077 832 aa16.52■□□□□ 0.24
HMGXB3-201ENST00000502717 RCBTB2O95199 551 aa16.52■□□□□ 0.24
HMGXB3-201ENST00000502717 EIF5AP63241 154 aaKnown RBP16.52■□□□□ 0.24
HMGXB3-201ENST00000502717 SELENOWP63302 87 aa16.52■□□□□ 0.24
HMGXB3-201ENST00000502717 SNTB2Q13425 540 aaKnown RBP16.52■□□□□ 0.24
HMGXB3-201ENST00000502717 INO80EQ8NBZ0 244 aaPredicted RBP16.52■□□□□ 0.24
HMGXB3-201ENST00000502717 GATAD2BQ8WXI9 593 aa16.52■□□□□ 0.24
HMGXB3-201ENST00000502717 NXPE2Q96DL1 559 aa16.52■□□□□ 0.24
HMGXB3-201ENST00000502717 ZC3H10Q96K80 434 aaKnown RBP16.52■□□□□ 0.24
HMGXB3-201ENST00000502717 DHRS1Q96LJ7 313 aa16.52■□□□□ 0.24
HMGXB3-201ENST00000502717 S100A13Q99584 98 aa16.52■□□□□ 0.24
HMGXB3-201ENST00000502717 A0A0D9SEW6 157 aa16.52■□□□□ 0.24
HMGXB3-201ENST00000502717 A0A1B0GVI7 797 aa16.52■□□□□ 0.24
HMGXB3-201ENST00000502717 OSMP13725 252 aa16.52■□□□□ 0.24
HMGXB3-201ENST00000502717 TCEA2Q15560 299 aa16.52■□□□□ 0.24
HMGXB3-201ENST00000502717 TSEN15Q8WW01 171 aaKnown RBP16.52■□□□□ 0.24
HMGXB3-201ENST00000502717 COMMD4Q9H0A8 199 aa16.52■□□□□ 0.24
HMGXB3-201ENST00000502717 OR10H1Q9Y4A9 318 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms