RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 RASAL1O95294 804 aa17.18■□□□□ 0.34
HOXD11-202ENST00000498438 CLDN9O95484 217 aa17.18■□□□□ 0.34
HOXD11-202ENST00000498438 SBK3P0C264 359 aa17.18■□□□□ 0.34
HOXD11-202ENST00000498438 MYBL2P10244 700 aa17.18■□□□□ 0.34
HOXD11-202ENST00000498438 EDN3P14138 238 aa17.18■□□□□ 0.34
HOXD11-202ENST00000498438 CD96P40200 585 aa17.18■□□□□ 0.34
HOXD11-202ENST00000498438 CCNG1P51959 295 aa17.18■□□□□ 0.34
HOXD11-202ENST00000498438 SLC29A2Q14542 456 aa17.18■□□□□ 0.34
HOXD11-202ENST00000498438 OR1C1Q15619 314 aa17.18■□□□□ 0.34
HOXD11-202ENST00000498438 ZRSR2Q15696 482 aaKnown RBP17.18■□□□□ 0.34
HOXD11-202ENST00000498438 ZNF324BQ6AW86 544 aaPredicted RBP17.18■□□□□ 0.34
HOXD11-202ENST00000498438 OR4C11Q6IEV9 310 aa17.18■□□□□ 0.34
HOXD11-202ENST00000498438 TIFABQ6ZNK6 161 aa17.18■□□□□ 0.34
HOXD11-202ENST00000498438 WDR20Q8TBZ3 569 aa17.18■□□□□ 0.34
HOXD11-202ENST00000498438 NCLNQ969V3 563 aa17.18■□□□□ 0.34
HOXD11-202ENST00000498438 ATP6V1E2Q96A05 226 aa17.18■□□□□ 0.34
HOXD11-202ENST00000498438 RGMAQ96B86 450 aa17.18■□□□□ 0.34
HOXD11-202ENST00000498438 HES7Q9BYE0 225 aa17.18■□□□□ 0.34
HOXD11-202ENST00000498438 DEFB126Q9BYW3 111 aa17.18■□□□□ 0.34
HOXD11-202ENST00000498438 L2HGDHQ9H9P8 463 aa17.18■□□□□ 0.34
HOXD11-202ENST00000498438 SPACA6W5XKT8 324 aa17.18■□□□□ 0.34
HOXD11-202ENST00000498438 SYNDIG1LA6NDD5 238 aa17.17■□□□□ 0.34
HOXD11-202ENST00000498438 LDB3O75112 727 aa17.17■□□□□ 0.34
HOXD11-202ENST00000498438 IFNA16P05015 189 aa17.17■□□□□ 0.34
HOXD11-202ENST00000498438 RPS17P08708 135 aaKnown RBP17.17■□□□□ 0.34
HOXD11-202ENST00000498438 RNF224P0DH78 156 aa17.17■□□□□ 0.34
HOXD11-202ENST00000498438 CPN2P22792 545 aa17.17■□□□□ 0.34
HOXD11-202ENST00000498438 TPP2P29144 1249 aaPredicted RBP17.17■□□□□ 0.34
HOXD11-202ENST00000498438 CLCN2P51788 898 aa17.17■□□□□ 0.34
HOXD11-202ENST00000498438 NEK2P51955 445 aa17.17■□□□□ 0.34
HOXD11-202ENST00000498438 MLF1P58340 268 aa17.17■□□□□ 0.34
HOXD11-202ENST00000498438 PMP22Q01453 160 aa17.17■□□□□ 0.34
HOXD11-202ENST00000498438 OC90Q02509 493 aaPredicted RBP17.17■□□□□ 0.34
HOXD11-202ENST00000498438 STX4Q12846 297 aa17.17■□□□□ 0.34
HOXD11-202ENST00000498438 TRAF3Q13114 568 aa17.17■□□□□ 0.34
HOXD11-202ENST00000498438 ELAVL1Q15717 326 aaKnown RBP17.17■□□□□ 0.34
HOXD11-202ENST00000498438 TEX35Q5T0J7 233 aa17.17■□□□□ 0.34
HOXD11-202ENST00000498438 ZNF468Q5VIY5 522 aaPredicted RBP17.17■□□□□ 0.34
HOXD11-202ENST00000498438 SPINK14Q6IE38 97 aa17.17■□□□□ 0.34
HOXD11-202ENST00000498438 RPS27LQ71UM5 84 aaKnown RBP17.17■□□□□ 0.34
HOXD11-202ENST00000498438 TMEM151AQ8N4L1 468 aa17.17■□□□□ 0.34
HOXD11-202ENST00000498438 SSC4DQ8WTU2 575 aa17.17■□□□□ 0.34
HOXD11-202ENST00000498438 NR4A3Q92570 626 aa17.17■□□□□ 0.34
HOXD11-202ENST00000498438 VMP1Q96GC9 406 aa17.17■□□□□ 0.34
HOXD11-202ENST00000498438 ALOXE3Q9BYJ1 711 aa17.17■□□□□ 0.34
HOXD11-202ENST00000498438 ZBTB26Q9HCK0 441 aa17.17■□□□□ 0.34
HOXD11-202ENST00000498438 KLHL1Q9NR64 748 aa17.17■□□□□ 0.34
HOXD11-202ENST00000498438 PSMC3IPQ9P2W1 217 aaPredicted RBP17.17■□□□□ 0.34
HOXD11-202ENST00000498438 ZNF223Q9UK11 482 aaPredicted RBP17.17■□□□□ 0.34
HOXD11-202ENST00000498438 PPIEQ9UNP9 301 aaKnown RBP17.17■□□□□ 0.34
HOXD11-202ENST00000498438 UTP20O75691 2785 aaKnown RBP17.17■□□□□ 0.34
HOXD11-202ENST00000498438 DOPEY1Q5JWR5 2465 aa17.16■□□□□ 0.34
HOXD11-202ENST00000498438 IQANK1A0A1B0GTG1 560 aa17.16■□□□□ 0.34
HOXD11-202ENST00000498438 A8MT66 165 aa17.16■□□□□ 0.34
HOXD11-202ENST00000498438 ETHE1O95571 254 aa17.16■□□□□ 0.34
HOXD11-202ENST00000498438 PTX3P26022 381 aaPredicted RBP17.16■□□□□ 0.34
HOXD11-202ENST00000498438 TDGF1P3P51864 188 aa17.16■□□□□ 0.34
HOXD11-202ENST00000498438 ID2Q02363 134 aa17.16■□□□□ 0.34
HOXD11-202ENST00000498438 SRSF11Q05519 484 aaKnown RBP17.16■□□□□ 0.34
HOXD11-202ENST00000498438 SLAMF1Q13291 335 aa17.16■□□□□ 0.34
HOXD11-202ENST00000498438 ZCCHC7Q8N3Z6 543 aaKnown RBP17.16■□□□□ 0.34
HOXD11-202ENST00000498438 THAP3Q8WTV1 239 aaPredicted RBP17.16■□□□□ 0.34
HOXD11-202ENST00000498438 C5orf34Q96MH7 638 aa17.16■□□□□ 0.34
HOXD11-202ENST00000498438 PSMG3-AS1Q96PY0 264 aa17.16■□□□□ 0.34
HOXD11-202ENST00000498438 NTMT1Q9BV86 223 aa17.16■□□□□ 0.34
HOXD11-202ENST00000498438 ZNF717Q9BY31 904 aaPredicted RBP17.16■□□□□ 0.34
HOXD11-202ENST00000498438 SEMA4BQ9NPR2 832 aaPredicted RBP17.16■□□□□ 0.34
HOXD11-202ENST00000498438 FETUBQ9UGM5 382 aa17.16■□□□□ 0.34
HOXD11-202ENST00000498438 ERRFI1Q9UJM3 462 aaPredicted RBP17.16■□□□□ 0.34
HOXD11-202ENST00000498438 PCDHGB6Q9Y5F9 930 aa17.16■□□□□ 0.34
HOXD11-202ENST00000498438 FOXE1O00358 373 aaPredicted RBP17.15■□□□□ 0.34
HOXD11-202ENST00000498438 FCHO1O14526 889 aa17.15■□□□□ 0.34
HOXD11-202ENST00000498438 EEDO75530 441 aaKnown RBP17.15■□□□□ 0.34
HOXD11-202ENST00000498438 NEURL1O76050 574 aa17.15■□□□□ 0.34
HOXD11-202ENST00000498438 CRYABP02511 175 aaKnown RBP17.15■□□□□ 0.34
HOXD11-202ENST00000498438 CD46P15529 392 aa17.15■□□□□ 0.34
HOXD11-202ENST00000498438 GPR143P51810 404 aa17.15■□□□□ 0.34
HOXD11-202ENST00000498438 ARFIP1P53367 373 aa17.15■□□□□ 0.34
HOXD11-202ENST00000498438 HNRNPH2P55795 449 aaKnown RBP17.15■□□□□ 0.34
HOXD11-202ENST00000498438 SERTAD2Q14140 314 aa17.15■□□□□ 0.34
HOXD11-202ENST00000498438 ARMC10Q8N2F6 343 aa17.15■□□□□ 0.34
HOXD11-202ENST00000498438 TMEM132CQ8N3T6 1108 aa17.15■□□□□ 0.34
HOXD11-202ENST00000498438 EIF1ADQ8N9N8 165 aaKnown RBP17.15■□□□□ 0.34
HOXD11-202ENST00000498438 ZNF483Q8TF39 744 aaPredicted RBP17.15■□□□□ 0.34
HOXD11-202ENST00000498438 ANKRD9Q96BM1 317 aaPredicted RBP17.15■□□□□ 0.34
HOXD11-202ENST00000498438 MTFMTQ96DP5 389 aaKnown RBP17.15■□□□□ 0.34
HOXD11-202ENST00000498438 SCMH1Q96GD3 660 aa17.15■□□□□ 0.34
HOXD11-202ENST00000498438 TMEM216Q9P0N5 145 aa17.15■□□□□ 0.34
HOXD11-202ENST00000498438 LRFN1Q9P244 771 aa17.15■□□□□ 0.34
HOXD11-202ENST00000498438 VTI1BQ9UEU0 232 aa17.15■□□□□ 0.34
HOXD11-202ENST00000498438 TBK1Q9UHD2 729 aa17.15■□□□□ 0.34
HOXD11-202ENST00000498438 PHF11Q9UIL8 331 aa17.15■□□□□ 0.34
HOXD11-202ENST00000498438 CLCA3PQ9Y6N3 262 aa17.15■□□□□ 0.34
HOXD11-202ENST00000498438 DIDO1Q9BTC0 2240 aaKnown RBP17.15■□□□□ 0.34
HOXD11-202ENST00000498438 A0A0A6YYD5 115 aa17.14■□□□□ 0.33
HOXD11-202ENST00000498438 A0A1B0GTL3 188 aa17.14■□□□□ 0.33
HOXD11-202ENST00000498438 GOLGA8RI6L899 631 aa17.14■□□□□ 0.33
HOXD11-202ENST00000498438 FGF17O60258 216 aa17.14■□□□□ 0.33
HOXD11-202ENST00000498438 PRKNO60260 465 aaPredicted RBP17.14■□□□□ 0.33
HOXD11-202ENST00000498438 BSGP35613 385 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms