RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 EMX2Q04743 252 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 KLC1Q07866 573 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 SMU1Q2TAY7 513 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 VWA2Q5GFL6 755 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 NDUFAF5Q5TEU4 345 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 C18orf63Q68DL7 685 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 MRM1Q6IN84 353 aaKnown RBP12.8□□□□□ -0.36
CPNE1-227ENST00000498056 SPATA19Q7Z5L4 167 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 MMP21Q8N119 569 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 ENDOVQ8N8Q3 282 aaKnown RBP12.8□□□□□ -0.36
CPNE1-227ENST00000498056 STT3BQ8TCJ2 826 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 GFM2Q969S9 779 aaKnown RBP12.8□□□□□ -0.36
CPNE1-227ENST00000498056 KIAA1143Q96AT1 154 aaPredicted RBP12.8□□□□□ -0.36
CPNE1-227ENST00000498056 TBC1D20Q96BZ9 403 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 MIEF2Q96C03 454 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 C11orf24Q96F05 449 aaPredicted RBP12.8□□□□□ -0.36
CPNE1-227ENST00000498056 NAF1Q96HR8 494 aaKnown RBP12.8□□□□□ -0.36
CPNE1-227ENST00000498056 FAIM2Q9BWQ8 316 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 KCNK13Q9HB14 408 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 MIEF1Q9NQG6 463 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 SIRT5Q9NXA8 310 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 MS4A12Q9NXJ0 267 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 ASIC5Q9NY37 505 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 BAIAP2L1Q9UHR4 511 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 ACSL6Q9UKU0 697 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 PADI2Q9Y2J8 665 aa12.8□□□□□ -0.36
CPNE1-227ENST00000498056 GLOD5A6NK44 160 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 FAM227AF5H4B4 570 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 AKAP10O43572 662 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 SNX3O60493 162 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 CNOT3O75175 753 aaKnown RBP12.79□□□□□ -0.36
CPNE1-227ENST00000498056 NCF2P19878 526 aaPredicted RBP12.79□□□□□ -0.36
CPNE1-227ENST00000498056 TCN2P20062 427 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 TLX1P31314 330 aaPredicted RBP12.79□□□□□ -0.36
CPNE1-227ENST00000498056 GSTM5P46439 218 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 ASMTP46597 345 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 HNRNPFP52597 415 aaKnown RBP12.79□□□□□ -0.36
CPNE1-227ENST00000498056 RPS18P62269 152 aaKnown RBP12.79□□□□□ -0.36
CPNE1-227ENST00000498056 TRA2BP62995 288 aaKnown RBP12.79□□□□□ -0.36
CPNE1-227ENST00000498056 DNASE1L3Q13609 305 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 ERV3-1Q14264 604 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 RPS6KA2Q15349 733 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 TGIF1Q15583 401 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 NKG7Q16617 165 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 OR52E8Q6IFG1 317 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 ZNF517Q6ZMY9 492 aaPredicted RBP12.79□□□□□ -0.36
CPNE1-227ENST00000498056 IKBIPQ70UQ0 350 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 OVCH1Q7RTY7 1134 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 CLNKQ7Z7G1 428 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 VASH2Q86V25 355 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 TMEM52Q8NDY8 209 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 STON2Q8WXE9 905 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 EGLN2Q96KS0 407 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 OR1F2PQ96R84 312 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 SPRY4Q9C004 299 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 CLK4Q9HAZ1 481 aaKnown RBP12.79□□□□□ -0.36
CPNE1-227ENST00000498056 KCMF1Q9P0J7 381 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 C5AR2Q9P296 337 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 NXT1Q9UKK6 140 aaKnown RBP12.79□□□□□ -0.36
CPNE1-227ENST00000498056 TRIM33Q9UPN9 1127 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 PTRH2Q9Y3E5 179 aaKnown RBP12.79□□□□□ -0.36
CPNE1-227ENST00000498056 ASB4Q9Y574 426 aa12.79□□□□□ -0.36
CPNE1-227ENST00000498056 NUP214P35658 2090 aaPredicted RBP12.78□□□□□ -0.36
CPNE1-227ENST00000498056 IGLV3-12A0A075B6K2 115 aa12.78□□□□□ -0.36
CPNE1-227ENST00000498056 A0A1W2PR48 441 aa12.78□□□□□ -0.36
CPNE1-227ENST00000498056 C1orf226A1L170 272 aa12.78□□□□□ -0.36
CPNE1-227ENST00000498056 SRRM3A6NNA2 597 aaPredicted RBP12.78□□□□□ -0.36
CPNE1-227ENST00000498056 FAM107AO95990 144 aa12.78□□□□□ -0.36
CPNE1-227ENST00000498056 ZGLP1P0C6A0 271 aa12.78□□□□□ -0.36
CPNE1-227ENST00000498056 IDO1P14902 403 aa12.78□□□□□ -0.36
CPNE1-227ENST00000498056 FOLR3P41439 243 aa12.78□□□□□ -0.36
CPNE1-227ENST00000498056 RPS15P62841 145 aaKnown RBP12.78□□□□□ -0.36
CPNE1-227ENST00000498056 MC1RQ01726 317 aa12.78□□□□□ -0.36
CPNE1-227ENST00000498056 C2orf80Q0P641 193 aa12.78□□□□□ -0.36
CPNE1-227ENST00000498056 SLC13A2Q13183 592 aa12.78□□□□□ -0.36
CPNE1-227ENST00000498056 HEPACAMQ14CZ8 416 aa12.78□□□□□ -0.36
CPNE1-227ENST00000498056 FAM69BQ5VUD6 431 aa12.78□□□□□ -0.36
CPNE1-227ENST00000498056 MRPL14Q6P1L8 145 aaKnown RBP12.78□□□□□ -0.36
CPNE1-227ENST00000498056 KCNE4Q8WWG9 221 aa12.78□□□□□ -0.36
CPNE1-227ENST00000498056 NKD1Q969G9 470 aa12.78□□□□□ -0.36
CPNE1-227ENST00000498056 TM4SF18Q96CE8 201 aa12.78□□□□□ -0.36
CPNE1-227ENST00000498056 KLHL29Q96CT2 875 aa12.78□□□□□ -0.36
CPNE1-227ENST00000498056 SPSB2Q99619 263 aa12.78□□□□□ -0.36
CPNE1-227ENST00000498056 CRB3Q9BUF7 120 aa12.78□□□□□ -0.36
CPNE1-227ENST00000498056 DPY30Q9C005 99 aa12.78□□□□□ -0.36
CPNE1-227ENST00000498056 SLC26A1Q9H2B4 701 aa12.78□□□□□ -0.36
CPNE1-227ENST00000498056 CCDC86Q9H6F5 360 aaKnown RBP12.78□□□□□ -0.36
CPNE1-227ENST00000498056 RPF2Q9H7B2 306 aaKnown RBP12.78□□□□□ -0.36
CPNE1-227ENST00000498056 WDR54Q9H977 334 aa12.78□□□□□ -0.36
CPNE1-227ENST00000498056 GPN2Q9H9Y4 310 aaPredicted RBP12.78□□□□□ -0.36
CPNE1-227ENST00000498056 PRTFDC1Q9NRG1 225 aa12.78□□□□□ -0.36
CPNE1-227ENST00000498056 MKL2Q9ULH7 1088 aa12.78□□□□□ -0.36
CPNE1-227ENST00000498056 ACACAQ13085 2346 aa12.77□□□□□ -0.36
CPNE1-227ENST00000498056 LOC101059948A0A1B0GTJ6 334 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 C9JVG2 144 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 CYR61O00622 381 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 SCAMP2O15127 329 aaKnown RBP12.77□□□□□ -0.37
CPNE1-227ENST00000498056 PROM1O43490 865 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 LDB3O75112 727 aa12.77□□□□□ -0.37
CPNE1-227ENST00000498056 ERAL1O75616 437 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms