RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 SERINC2Q96SA4 455 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 ROGDIQ9GZN7 287 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 PCTPQ9UKL6 214 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 MRPS33Q9Y291 106 aaKnown RBP14.38□□□□□ -0.11
NUP50-219ENST00000497960 NTNG1Q9Y2I2 539 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 HIVEP3Q5T1R4 2406 aa14.38□□□□□ -0.11
NUP50-219ENST00000497960 SPTAN1Q13813 2472 aaKnown RBP14.37□□□□□ -0.11
NUP50-219ENST00000497960 TCRBV16S1A1N1A0A5B0 115 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 G3V2L1 256 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 E2F3O00716 465 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 TM9SF1O15321 606 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 ZWINTO95229 277 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 CPA3P15088 417 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 HERVK_113P63132 956 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 PCDH1Q08174 1060 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 E2F2Q14209 437 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 PCLAFQ15004 111 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 INAQ16352 499 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 TMEM35AQ53FP2 167 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 FCRLBQ6BAA4 426 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 ADNP2Q6IQ32 1131 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 METTL2BQ6P1Q9 378 aaKnown RBP14.37□□□□□ -0.11
NUP50-219ENST00000497960 CHSY3Q70JA7 882 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 MYLK4Q86YV6 388 aaPredicted RBP14.37□□□□□ -0.11
NUP50-219ENST00000497960 BCORP1Q8N888 145 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 ANKRD42Q8N9B4 389 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 ZNF473Q8WTR7 871 aaKnown RBP14.37□□□□□ -0.11
NUP50-219ENST00000497960 FAR1Q8WVX9 515 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 SREK1Q8WXA9 508 aaKnown RBP14.37□□□□□ -0.11
NUP50-219ENST00000497960 ARL8AQ96BM9 186 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 ATP6V1G3Q96LB4 118 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 KCNC2Q96PR1 638 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 F2RL3Q96RI0 385 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 SH3GL2Q99962 352 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 ERVK-6Q9BXR3 956 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 PRTFDC1Q9NRG1 225 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 ZNF446Q9NWS9 450 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 ADGRE2Q9UHX3 823 aa14.37□□□□□ -0.11
NUP50-219ENST00000497960 USP9XQ93008 2570 aaPredicted RBP14.37□□□□□ -0.11
NUP50-219ENST00000497960 IGKV3D-11A0A0A0MRZ8 115 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 SAGE2PA6NJ88 616 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 SUPT7LO94864 414 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 TBX6O95947 436 aaPredicted RBP14.36□□□□□ -0.11
NUP50-219ENST00000497960 CERS1P27544 350 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 CCNG1P51959 295 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 PRKAA2P54646 552 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 HSD17B7P56937 341 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 SLC13A2Q13183 592 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 TTMPQ5BVD1 217 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 ZNF678Q5SXM1 525 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 LIPMQ5VYY2 423 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 GRHL2Q6ISB3 625 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 CRLF3Q8IUI8 442 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 ZNF595Q8IYB9 648 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 LAS2Q8IYD9 372 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 LGI4Q8N135 537 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 BEST3Q8N1M1 668 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 ST6GALNAC3Q8NDV1 305 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 OR7G3Q8NG95 312 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 ZNF483Q8TF39 744 aaPredicted RBP14.36□□□□□ -0.11
NUP50-219ENST00000497960 ATP6V1E2Q96A05 226 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 CMTM7Q96FZ5 175 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 NSUN5Q96P11 429 aaKnown RBP14.36□□□□□ -0.11
NUP50-219ENST00000497960 UTP23Q9BRU9 249 aaKnown RBP14.36□□□□□ -0.11
NUP50-219ENST00000497960 TBCDQ9BTW9 1192 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 MS4A8Q9BY19 250 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 ACTR8Q9H981 624 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 SEMA4BQ9NPR2 832 aaPredicted RBP14.36□□□□□ -0.11
NUP50-219ENST00000497960 NECTIN3Q9NQS3 549 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 OLAHQ9NV23 265 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 DAPP1Q9UN19 280 aa14.36□□□□□ -0.11
NUP50-219ENST00000497960 SETXQ7Z333 2677 aaKnown RBP14.36□□□□□ -0.11
NUP50-219ENST00000497960 ZGRF1Q86YA3 2104 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 TMEM120BA0PK00 339 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 SYNDIG1LA6NDD5 238 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 A8MUA0 341 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 HMGB1P1B2RPK0 211 aaPredicted RBP14.35□□□□□ -0.11
NUP50-219ENST00000497960 PRAMEF2O60811 474 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 TGFB1P01137 390 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 EDN3P14138 238 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 LIM2P55344 173 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 PHEXP78562 749 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 ASPHQ12797 758 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 DDX39BQ13838 428 aaKnown RBP14.35□□□□□ -0.11
NUP50-219ENST00000497960 AP5B1Q2VPB7 878 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 CFAP157Q5JU67 520 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 LIPJQ5W064 366 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 RPS27LQ71UM5 84 aaKnown RBP14.35□□□□□ -0.11
NUP50-219ENST00000497960 C10orf107Q8IVU9 208 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 SCUBE1Q8IWY4 988 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 CCNYL1Q8N7R7 359 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 FAM47BQ8NA70 645 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 ELP5Q8TE02 316 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 REPS1Q96D71 796 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 L3HYPDHQ96EM0 354 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 CENPKQ9BS16 269 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 MECRQ9BV79 373 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 IPPKQ9H8X2 491 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 LYRM4Q9HD34 91 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 PRDM7Q9NQW5 492 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms