RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 EXTL2Q9UBQ6 330 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 HCN2Q9UL51 889 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 MAB21L2Q9Y586 359 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 SESN1Q9Y6P5 492 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 MYO10Q9HD67 2058 aa12.51□□□□□ -0.41
GAPVD1-220ENST00000497580 RPS10-NUDT3A0A1W2PQS6 291 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 RFXAPO00287 272 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 TLX2O43763 284 aaPredicted RBP12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 SRP9P49458 86 aaKnown RBP12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 ARHGDIBP52566 201 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 ZNF91Q05481 1191 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 GPR176Q14439 515 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 MS4A15Q8N5U1 240 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 HERVK_113Q902F9 699 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 TM9SF4Q92544 642 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 TBC1D20Q96BZ9 403 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 BOCQ9BWV1 1114 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 SAP130Q9H0E3 1048 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 NLE1Q9NVX2 485 aaPredicted RBP12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 ADAM30Q9UKF2 790 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 C2orf92A0A1B0GVN3 265 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 SYN3O14994 580 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 KDM4BO94953 1096 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 ETFAP13804 333 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 SF3A2Q15428 464 aaKnown RBP12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 RAB41Q5JT25 222 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 FAM46DQ8NEK8 389 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 ZFP64Q9NPA5 681 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 ACSL6Q9UKU0 697 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 TLR6Q9Y2C9 796 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 EEF1E1O43324 174 aaKnown RBP12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 OR10H3O60404 316 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 CLDN9O95484 217 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 IL1AP01583 271 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 APOC3P02656 99 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 RRASP10301 218 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 ITPKAP23677 461 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 CRYBA2P53672 197 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 B2MP61769 119 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 RPS7P62081 194 aaKnown RBP12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 ACVR1Q04771 509 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 ZNF33BQ06732 778 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 TWF1Q12792 350 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 ATP13A5Q4VNC0 1218 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 ZNF772Q68DY9 489 aaPredicted RBP12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 MTFR2Q6P444 385 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 C19orf48Q6RUI8 117 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 FAM151BQ6UXP7 276 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 HSDL2Q6YN16 418 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 OR2T35Q8NGX2 323 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 OR10Z1Q8NGY1 313 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 OR8K5Q8NH50 307 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 SMG7Q92540 1137 aaKnown RBP12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 PIGKQ92643 395 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 RADILQ96JH8 1075 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 FOPNLQ96NB1 174 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 RBP7Q96R05 134 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 USB1Q9BQ65 265 aaKnown RBP12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 TMEM43Q9BTV4 400 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 TMEM121BQ9BXQ6 578 aaPredicted RBP12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 CNOT2Q9NZN8 540 aaKnown RBP12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 GSTK1Q9Y2Q3 226 aa12.5□□□□□ -0.41
GAPVD1-220ENST00000497580 CHURC1-FNTBB4DL54 471 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 SLC30A4O14863 429 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 BET1O15155 118 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 LPOP22079 712 aaPredicted RBP12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 HTR7P34969 479 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 RGRP47804 291 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 RGS4P49798 205 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 ZNF140P52738 457 aaPredicted RBP12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 ZNF280AP59817 542 aaPredicted RBP12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 PPP3R1P63098 170 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 LGALSLQ3ZCW2 172 aaPredicted RBP12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 MANEALQ5VSG8 457 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 C11orf65Q8NCR3 313 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 OR7D4Q8NG98 312 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 OR5AK3PQ8NH89 298 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 NFKBIDQ8NI38 313 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 LKAAEAR1Q8TD35 194 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 MTERF1Q99551 399 aaKnown RBP12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 MROH8Q9H579 483 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 NMNAT1Q9HAN9 279 aaPredicted RBP12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 FOLH1BQ9HBA9 442 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 NDUFB11Q9NX14 153 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 SDHAF2Q9NX18 166 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 GMEB2Q9UKD1 530 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 A0A0D9SEW6 157 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 TCRBV16S1A1N1A0A5B0 115 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 STK16O75716 305 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 SLC25A14O95258 325 aaPredicted RBP12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 CTPS1P17812 591 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 LHX1P48742 406 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 COL28A1Q2UY09 1125 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 IDNKQ5T6J7 187 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 GDPGP1Q6ZNW5 385 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 TSEN54Q7Z6J9 526 aaKnown RBP12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 GPR156Q8NFN8 814 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 OR52H1Q8NGJ2 320 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 SLC5A11Q8WWX8 675 aa12.49□□□□□ -0.41
GAPVD1-220ENST00000497580 OTULINQ96BN8 352 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms