RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 FURINP09958 794 aa7.96□□□□□ -1.13
USP54-215ENST00000497106 HPGDP15428 266 aa7.96□□□□□ -1.13
USP54-215ENST00000497106 SOX11P35716 441 aa7.96□□□□□ -1.13
USP54-215ENST00000497106 CLK3P49761 638 aaKnown RBP7.96□□□□□ -1.13
USP54-215ENST00000497106 ERFP50548 548 aa7.96□□□□□ -1.13
USP54-215ENST00000497106 RAB38P57729 211 aa7.96□□□□□ -1.13
USP54-215ENST00000497106 CDK6Q00534 326 aa7.96□□□□□ -1.13
USP54-215ENST00000497106 ZNF155Q12901 538 aaPredicted RBP7.96□□□□□ -1.13
USP54-215ENST00000497106 SLC13A2Q13183 592 aa7.96□□□□□ -1.13
USP54-215ENST00000497106 MYBPC3Q14896 1274 aa7.96□□□□□ -1.13
USP54-215ENST00000497106 ZSWIM7Q19AV6 140 aa7.96□□□□□ -1.13
USP54-215ENST00000497106 RABL3Q5HYI8 236 aa7.96□□□□□ -1.13
USP54-215ENST00000497106 PAGE3Q5JUK9 113 aa7.96□□□□□ -1.13
USP54-215ENST00000497106 FUNDC1Q8IVP5 155 aa7.96□□□□□ -1.13
USP54-215ENST00000497106 Q8N9G6 341 aaPredicted RBP7.96□□□□□ -1.13
USP54-215ENST00000497106 OR8K5Q8NH50 307 aa7.96□□□□□ -1.13
USP54-215ENST00000497106 DNASE2BQ8WZ79 361 aa7.96□□□□□ -1.13
USP54-215ENST00000497106 RPF2Q9H7B2 306 aaKnown RBP7.96□□□□□ -1.13
USP54-215ENST00000497106 PRTFDC1Q9NRG1 225 aa7.96□□□□□ -1.13
USP54-215ENST00000497106 ZNF624Q9P2J8 865 aaPredicted RBP7.96□□□□□ -1.13
USP54-215ENST00000497106 C19orf25Q9UFG5 118 aaPredicted RBP7.96□□□□□ -1.13
USP54-215ENST00000497106 M0R3G1 203 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 OR2B3O76000 313 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 ZNF888P0CJ79 500 aaPredicted RBP7.96□□□□□ -1.14
USP54-215ENST00000497106 GLB1P16278 677 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 PORP16435 677 aaPredicted RBP7.96□□□□□ -1.14
USP54-215ENST00000497106 UBE2IP63279 158 aaKnown RBP7.96□□□□□ -1.14
USP54-215ENST00000497106 TNFRSF17Q02223 184 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 COQ8BQ96D53 544 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 NRBF2Q96F24 287 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 RPS6KB2Q9UBS0 482 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 MBD1Q9UIS9 605 aaPredicted RBP7.96□□□□□ -1.14
USP54-215ENST00000497106 SLC22A7Q9Y694 548 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 MYOFQ9NZM1 2061 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 A0A0G2JN53 185 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 OR2A25A4D2G3 310 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 LRIT2A6NDA9 550 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 GABRR3A8MPY1 467 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 H0YGG7 62 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 NME4O00746 187 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 NUDT21O43809 227 aaKnown RBP7.96□□□□□ -1.14
USP54-215ENST00000497106 C8BP07358 591 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 TPP2P29144 1249 aaPredicted RBP7.96□□□□□ -1.14
USP54-215ENST00000497106 ARF3P61204 181 aaPredicted RBP7.96□□□□□ -1.14
USP54-215ENST00000497106 ESRRGP62508 458 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 MRPS35P82673 323 aaKnown RBP7.96□□□□□ -1.14
USP54-215ENST00000497106 TLR1Q15399 786 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 SPRED3Q2MJR0 410 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 DEFB134Q4QY38 66 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 KIAA1614Q5VZ46 1190 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 TTC23Q5W5X9 447 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 BPHLQ86WA6 291 aaPredicted RBP7.96□□□□□ -1.14
USP54-215ENST00000497106 ADGRF3Q8IZF5 1079 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 GALNT4Q8N4A0 578 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 WDR60Q8WVS4 1066 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 GEMIN6Q8WXD5 167 aaKnown RBP7.96□□□□□ -1.14
USP54-215ENST00000497106 PRRX2Q99811 253 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 CCM2LQ9NUG4 571 aaPredicted RBP7.96□□□□□ -1.14
USP54-215ENST00000497106 CMTM6Q9NX76 183 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 COPS7AQ9UBW8 275 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 SEC14L3Q9UDX4 400 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 PRODH2Q9UF12 536 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 C3orf18Q9UK00 162 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 RARRES3Q9UL19 164 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 RAB26Q9ULW5 256 aa7.96□□□□□ -1.14
USP54-215ENST00000497106 MAGEA13PA6NCF6 341 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 C9J4A7 227 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 SERPINA1P01009 418 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 IFNW1P05000 195 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 FBLP22087 321 aaKnown RBP7.95□□□□□ -1.14
USP54-215ENST00000497106 ITGA1P56199 1179 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 REEP3Q6NUK4 255 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 ERMP1Q7Z2K6 904 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 LINC00471Q8N535 108 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 NAF1Q96HR8 494 aaKnown RBP7.95□□□□□ -1.14
USP54-215ENST00000497106 GFM1Q96RP9 751 aaKnown RBP7.95□□□□□ -1.14
USP54-215ENST00000497106 SLC39A3Q9BRY0 314 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 GORASP2Q9H8Y8 452 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 SCHIP1Q9P0W5 487 aaPredicted RBP7.95□□□□□ -1.14
USP54-215ENST00000497106 GBF1Q92538 1859 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 SLC9B1P1A6NJY1 282 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 SAC3D1A6NKF1 404 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 NOBOXO60393 691 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 ALAS2P22557 587 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 PCGF2P35227 344 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 XKP51811 444 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 HSD11B2P80365 405 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 E2F2Q14209 437 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 LRRC36Q1X8D7 754 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 ARHGAP40Q5TG30 622 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 LRRC56Q8IYG6 542 aaPredicted RBP7.95□□□□□ -1.14
USP54-215ENST00000497106 MS4A6EQ96DS6 147 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 PYURFQ96I23 114 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 LOXL4Q96JB6 756 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 CPPED1Q9BRF8 314 aaPredicted RBP7.95□□□□□ -1.14
USP54-215ENST00000497106 SARGQ9BW04 601 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 SLC6A20Q9NP91 592 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 PCDHB14Q9Y5E9 798 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 H0YJX3 145 aa7.95□□□□□ -1.14
USP54-215ENST00000497106 H3BNH8 94 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms