RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 INPP5KQ9BT40 448 aa2.31□□□□□ -2.04
VPS26A-208ENST00000497022 ZBP1Q9H171 429 aa2.31□□□□□ -2.04
VPS26A-208ENST00000497022 OR10A4Q9H209 315 aa2.31□□□□□ -2.04
VPS26A-208ENST00000497022 MTIF3Q9H2K0 278 aaKnown RBP2.31□□□□□ -2.04
VPS26A-208ENST00000497022 TTLL3Q9Y4R7 772 aa2.31□□□□□ -2.04
VPS26A-208ENST00000497022 OR5H15A6NDH6 313 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 C5orf52A6NGY3 159 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 FAM58BPP0C7Q3 252 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 SKILP12757 684 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 FASP25445 335 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 HMGCS2P54868 508 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 GPR50Q13585 617 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 TOMM20Q15388 145 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 C17orf58Q2M2W7 97 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 LIPJQ5W064 366 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 ZNF776Q68DI1 518 aaPredicted RBP2.3□□□□□ -2.04
VPS26A-208ENST00000497022 CGB2Q6NT52 195 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 NLRP14Q86W24 1093 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 CREBRFQ8IUR6 639 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 CCDC71Q8IV32 467 aaPredicted RBP2.3□□□□□ -2.04
VPS26A-208ENST00000497022 CLEC1AQ8NC01 280 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 CCDC191Q8NCU4 936 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 Q8NFD4 153 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 BEST4Q8NFU0 473 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 SAP25Q8TEE9 199 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 GTSF1Q8WW33 167 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 NTNG2Q96CW9 530 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 PPP1R16AQ96I34 528 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 MCCC1Q96RQ3 725 aaPredicted RBP2.3□□□□□ -2.04
VPS26A-208ENST00000497022 VIPAS39Q9H9C1 493 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.3□□□□□ -2.04
VPS26A-208ENST00000497022 CLIC5Q9NZA1 410 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 IL17CQ9P0M4 197 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 RSPH14Q9UHP6 348 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 ITGA11Q9UKX5 1188 aa2.3□□□□□ -2.04
VPS26A-208ENST00000497022 ZSCAN5CA6NGD5 496 aaPredicted RBP2.29□□□□□ -2.04
VPS26A-208ENST00000497022 ANKDD1BA6NHY2 528 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 ZNF487B1APH4 448 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 B4GAT1O43505 415 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 RHBDL1O75783 438 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 GRAP2O75791 330 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 CALCAP01258 141 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 IGHG3P01860 377 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 RPN1P04843 607 aaKnown RBP2.29□□□□□ -2.04
VPS26A-208ENST00000497022 VIMP08670 466 aaKnown RBP2.29□□□□□ -2.04
VPS26A-208ENST00000497022 MGMTP16455 207 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 ACKR3P25106 362 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 KRT20P35900 424 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 NPY4RP50391 375 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 HLCSP50747 726 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 ZNF41P51814 821 aaPredicted RBP2.29□□□□□ -2.04
VPS26A-208ENST00000497022 CRMP1Q14194 572 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 ABRAXAS2Q15018 415 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 C1orf141Q5JVX7 400 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 DMKNQ6E0U4 476 aaPredicted RBP2.29□□□□□ -2.04
VPS26A-208ENST00000497022 PCGF5Q86SE9 256 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 ANKRD46Q86W74 232 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 CACUL1Q86Y37 369 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 GPR148Q8TDV2 347 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 NUS1Q96E22 293 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 ZNF274Q96GC6 653 aaPredicted RBP2.29□□□□□ -2.04
VPS26A-208ENST00000497022 CDHR1Q96JP9 859 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 CNDP2Q96KP4 475 aaKnown RBP2.29□□□□□ -2.04
VPS26A-208ENST00000497022 DEFB126Q9BYW3 111 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 NT5DC2Q9H857 520 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 S100A14Q9HCY8 104 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 PFDN4Q9NQP4 134 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 MED17Q9NVC6 651 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 CHCHD3Q9NX63 227 aaKnown RBP2.29□□□□□ -2.04
VPS26A-208ENST00000497022 GMEB2Q9UKD1 530 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 GTF3C1Q12789 2109 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 LRRK1Q38SD2 2015 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 CHD4Q14839 1912 aa2.29□□□□□ -2.04
VPS26A-208ENST00000497022 PFASO15067 1338 aa2.28□□□□□ -2.04
VPS26A-208ENST00000497022 KLF18A0A0U1RQI7 1052 aa2.28□□□□□ -2.04
VPS26A-208ENST00000497022 HTR3EA5X5Y0 456 aa2.28□□□□□ -2.04
VPS26A-208ENST00000497022 TMCO5BA8MYB1 307 aa2.28□□□□□ -2.04
VPS26A-208ENST00000497022 E7ENQ6 273 aa2.28□□□□□ -2.04
VPS26A-208ENST00000497022 NEDD8-MDP1E9PL57 170 aa2.28□□□□□ -2.04
VPS26A-208ENST00000497022 HDAC3O15379 428 aa2.28□□□□□ -2.04
VPS26A-208ENST00000497022 LRRTM2O43300 516 aa2.28□□□□□ -2.04
VPS26A-208ENST00000497022 EIF5BO60841 1220 aaKnown RBP2.28□□□□□ -2.04
VPS26A-208ENST00000497022 TSC22D2O75157 780 aa2.28□□□□□ -2.04
VPS26A-208ENST00000497022 PRB2P02812 416 aaPredicted RBP2.28□□□□□ -2.04
VPS26A-208ENST00000497022 LDHCP07864 332 aa2.28□□□□□ -2.04
VPS26A-208ENST00000497022 FHP07954 510 aa2.28□□□□□ -2.04
VPS26A-208ENST00000497022 OR9G9P0C7N8 305 aa2.28□□□□□ -2.04
VPS26A-208ENST00000497022 PPP2R1AP30153 589 aa2.28□□□□□ -2.04
VPS26A-208ENST00000497022 ALDH3B1P43353 468 aa2.28□□□□□ -2.04
VPS26A-208ENST00000497022 FHITP49789 147 aa2.28□□□□□ -2.04
VPS26A-208ENST00000497022 MEOX2P50222 304 aa2.28□□□□□ -2.04
VPS26A-208ENST00000497022 C2orf83Q53S99 150 aa2.28□□□□□ -2.04
VPS26A-208ENST00000497022 SAMD12Q8N8I0 201 aa2.28□□□□□ -2.04
VPS26A-208ENST00000497022 SMYD1Q8NB12 490 aa2.28□□□□□ -2.04
VPS26A-208ENST00000497022 RNF149Q8NC42 400 aa2.28□□□□□ -2.04
VPS26A-208ENST00000497022 SEPT8Q92599 483 aa2.28□□□□□ -2.04
VPS26A-208ENST00000497022 ESAMQ96AP7 390 aa2.28□□□□□ -2.04
VPS26A-208ENST00000497022 SGF29Q96ES7 293 aa2.28□□□□□ -2.04
VPS26A-208ENST00000497022 ZBED6CLQ96FA7 236 aaPredicted RBP2.28□□□□□ -2.04
VPS26A-208ENST00000497022 BSCL2Q96G97 398 aaPredicted RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms