RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 FITM2Q8N6M3 262 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 FAM47BQ8NA70 645 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 OR51Q1Q8NH59 317 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 ADAMTS18Q8TE60 1221 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 NUDT8Q8WV74 236 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 ERP27Q96DN0 273 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 PEX11GQ96HA9 241 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 SPRY4Q9C004 299 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 CLMPQ9H6B4 373 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 REEP4Q9H6H4 257 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 TMEM45AQ9NWC5 275 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 PCDHA9Q9Y5H5 950 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 SPACA6W5XKT8 324 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 SPTBN2O15020 2390 aa17.24■□□□□ 0.35
RGP1-202ENST00000496906 C1orf226A1L170 272 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 C9JVG2 144 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 PRKRAO75569 313 aaKnown RBP17.23■□□□□ 0.35
RGP1-202ENST00000496906 DLGAP3O95886 979 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 FURINP09958 794 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 DRD2P14416 443 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 CD1EP15812 388 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 PIK3R1P27986 724 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 HPCAL1P37235 193 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 ID4P47928 161 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 ZFP36L2P47974 494 aaKnown RBP17.23■□□□□ 0.35
RGP1-202ENST00000496906 CLNS1AP54105 237 aaKnown RBP17.23■□□□□ 0.35
RGP1-202ENST00000496906 KLF10Q13118 480 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 PDE7AQ13946 482 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 UGT8Q16880 541 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 FUNDC1Q8IVP5 155 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 GLB1L3Q8NCI6 653 aaPredicted RBP17.23■□□□□ 0.35
RGP1-202ENST00000496906 STARD8Q92502 1023 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 TESCQ96BS2 214 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 SLC46A1Q96NT5 459 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 DPH2Q9BQC3 489 aaPredicted RBP17.23■□□□□ 0.35
RGP1-202ENST00000496906 CCDC167Q9P0B6 97 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 TRPC4Q9UBN4 977 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 MAPRE3Q9UPY8 281 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 CAPN7Q9Y6W3 813 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 NVLO15381 856 aaKnown RBP17.23■□□□□ 0.35
RGP1-202ENST00000496906 KLK3P07288 261 aaPredicted RBP17.23■□□□□ 0.35
RGP1-202ENST00000496906 TLX1P31314 330 aaPredicted RBP17.23■□□□□ 0.35
RGP1-202ENST00000496906 XCR1P46094 333 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 CAMK2BQ13554 666 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 AGKQ53H12 422 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 FAM91A1Q658Y4 838 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 IGF2-ASQ6U949 168 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 ZNF517Q6ZMY9 492 aaPredicted RBP17.23■□□□□ 0.35
RGP1-202ENST00000496906 GALNT6Q8NCL4 622 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 TMEM52Q8NDY8 209 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 UCN3Q969E3 161 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 MTERF3Q96E29 417 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 ZNF764Q96H86 408 aaPredicted RBP17.23■□□□□ 0.35
RGP1-202ENST00000496906 RBCK1Q9BYM8 510 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 MIEF1Q9NQG6 463 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 PRDM9Q9NQV7 894 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 EHD3Q9NZN3 535 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 ATP6V1HQ9UI12 483 aa17.23■□□□□ 0.35
RGP1-202ENST00000496906 IGLV3-12A0A075B6K2 115 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 TEX51A0A1B0GUA7 166 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 GLOD5A6NK44 160 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 GABRR3A8MPY1 467 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 CAPN14A8MX76 684 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 FAM227AF5H4B4 570 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 TBX19O60806 448 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 ATXN8OSP0DMR3 200 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 PIM1P11309 404 aaPredicted RBP17.22■□□□□ 0.35
RGP1-202ENST00000496906 COX7A2P14406 83 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 AGXTP21549 392 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 RPL3P39023 403 aaKnown RBP17.22■□□□□ 0.35
RGP1-202ENST00000496906 ALDH9A1P49189 494 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 HNRNPFP52597 415 aaKnown RBP17.22■□□□□ 0.35
RGP1-202ENST00000496906 RCAN2Q14206 197 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 LCN10Q6JVE6 187 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 ANKRD26P1Q6NSI1 321 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 SLC48A1Q6P1K1 146 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 MED25Q71SY5 747 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 TRPM8Q7Z2W7 1104 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 R3HCC1LQ7Z5L2 792 aaKnown RBP17.22■□□□□ 0.35
RGP1-202ENST00000496906 CAMKMTQ7Z624 323 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 TREML1Q86YW5 311 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 TICAM1Q8IUC6 712 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 OR7A2PQ8NGA2 310 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 TBC1D20Q96BZ9 403 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 OR1F2PQ96R84 312 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 ZBTB18Q99592 522 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 YIPF2Q9BWQ6 316 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 NRSN2Q9GZP1 204 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 RPF2Q9H7B2 306 aaKnown RBP17.22■□□□□ 0.35
RGP1-202ENST00000496906 AKIRIN1Q9H9L7 192 aaPredicted RBP17.22■□□□□ 0.35
RGP1-202ENST00000496906 WDR41Q9HAD4 459 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 MKKSQ9NPJ1 570 aaPredicted RBP17.22■□□□□ 0.35
RGP1-202ENST00000496906 C5AR2Q9P296 337 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 CTSFQ9UBX1 484 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 CES1P1Q9UKY3 287 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 PCDHGA7Q9Y5G6 932 aa17.22■□□□□ 0.35
RGP1-202ENST00000496906 FAM234BA2RU67 622 aa17.21■□□□□ 0.35
RGP1-202ENST00000496906 WASHC1A8K0Z3 465 aa17.21■□□□□ 0.35
RGP1-202ENST00000496906 PGRMC2O15173 223 aa17.21■□□□□ 0.35
RGP1-202ENST00000496906 FHP07954 510 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms