RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 MED17Q9NVC6 651 aa2.89□□□□□ -1.95
CD46-218ENST00000496723 MGAT4AQ9UM21 535 aa2.89□□□□□ -1.95
CD46-218ENST00000496723 SPATA2Q9UM82 520 aa2.89□□□□□ -1.95
CD46-218ENST00000496723 ETV7Q9Y603 341 aa2.89□□□□□ -1.95
CD46-218ENST00000496723 TMCO5BA8MYB1 307 aa2.88□□□□□ -1.95
CD46-218ENST00000496723 LETM1O95202 739 aaPredicted RBP2.88□□□□□ -1.95
CD46-218ENST00000496723 SLU7O95391 586 aaKnown RBP2.88□□□□□ -1.95
CD46-218ENST00000496723 FAM200BP0CF97 657 aa2.88□□□□□ -1.95
CD46-218ENST00000496723 GJB2P29033 226 aa2.88□□□□□ -1.95
CD46-218ENST00000496723 SPRP35270 261 aaPredicted RBP2.88□□□□□ -1.95
CD46-218ENST00000496723 ELK3P41970 407 aa2.88□□□□□ -1.95
CD46-218ENST00000496723 SLC1A6P48664 564 aa2.88□□□□□ -1.95
CD46-218ENST00000496723 AKAP17AQ02040 695 aaKnown RBP2.88□□□□□ -1.95
CD46-218ENST00000496723 CYLC2Q14093 348 aaPredicted RBP2.88□□□□□ -1.95
CD46-218ENST00000496723 FASTKQ14296 549 aaKnown RBP2.88□□□□□ -1.95
CD46-218ENST00000496723 RNLSQ5VYX0 342 aa2.88□□□□□ -1.95
CD46-218ENST00000496723 PODNL1Q6PEZ8 512 aa2.88□□□□□ -1.95
CD46-218ENST00000496723 SIGLEC15Q6ZMC9 328 aa2.88□□□□□ -1.95
CD46-218ENST00000496723 HIPK1Q86Z02 1210 aa2.88□□□□□ -1.95
CD46-218ENST00000496723 LRRC49Q8IUZ0 686 aa2.88□□□□□ -1.95
CD46-218ENST00000496723 NME8Q8N427 588 aa2.88□□□□□ -1.95
CD46-218ENST00000496723 CARNMT1Q8N4J0 409 aa2.88□□□□□ -1.95
CD46-218ENST00000496723 C8orf46Q8TAG6 207 aa2.88□□□□□ -1.95
CD46-218ENST00000496723 KIAA1524Q8TCG1 905 aa2.88□□□□□ -1.95
CD46-218ENST00000496723 AFAP1L1Q8TED9 768 aa2.88□□□□□ -1.95
CD46-218ENST00000496723 SPATA17Q96L03 361 aa2.88□□□□□ -1.95
CD46-218ENST00000496723 RASL10BQ96S79 203 aa2.88□□□□□ -1.95
CD46-218ENST00000496723 CUEDC2Q9H467 287 aa2.88□□□□□ -1.95
CD46-218ENST00000496723 ZNF665Q9H7R5 613 aa2.88□□□□□ -1.95
CD46-218ENST00000496723 VPS18Q9P253 973 aa2.88□□□□□ -1.95
CD46-218ENST00000496723 ZNF319Q9P2F9 582 aa2.88□□□□□ -1.95
CD46-218ENST00000496723 ARMCX3Q9UH62 379 aaPredicted RBP2.88□□□□□ -1.95
CD46-218ENST00000496723 CPQQ9Y646 472 aa2.88□□□□□ -1.95
CD46-218ENST00000496723 ZNF646O15015 1829 aaPredicted RBP2.88□□□□□ -1.95
CD46-218ENST00000496723 RALGAPA1Q6GYQ0 2036 aa2.88□□□□□ -1.95
CD46-218ENST00000496723 TEX48A0A1B0GUV7 120 aa2.87□□□□□ -1.95
CD46-218ENST00000496723 OR5H15A6NDH6 313 aa2.87□□□□□ -1.95
CD46-218ENST00000496723 SRRM4A7MD48 611 aaKnown RBP2.87□□□□□ -1.95
CD46-218ENST00000496723 RAD51DO75771 328 aa2.87□□□□□ -1.95
CD46-218ENST00000496723 VENTXO95231 258 aa2.87□□□□□ -1.95
CD46-218ENST00000496723 HCKP08631 526 aa2.87□□□□□ -1.95
CD46-218ENST00000496723 SKILP12757 684 aa2.87□□□□□ -1.95
CD46-218ENST00000496723 MATKP42679 507 aa2.87□□□□□ -1.95
CD46-218ENST00000496723 RBP5P82980 135 aa2.87□□□□□ -1.95
CD46-218ENST00000496723 SLC3A1Q07837 685 aa2.87□□□□□ -1.95
CD46-218ENST00000496723 RNF212Q495C1 297 aa2.87□□□□□ -1.95
CD46-218ENST00000496723 NHLRC3Q5JS37 347 aa2.87□□□□□ -1.95
CD46-218ENST00000496723 ALKBH5Q6P6C2 394 aaKnown RBP2.87□□□□□ -1.95
CD46-218ENST00000496723 NUFIP2Q7Z417 695 aaKnown RBP2.87□□□□□ -1.95
CD46-218ENST00000496723 CACUL1Q86Y37 369 aa2.87□□□□□ -1.95
CD46-218ENST00000496723 CLEC1AQ8NC01 280 aa2.87□□□□□ -1.95
CD46-218ENST00000496723 HSD17B14Q9BPX1 270 aa2.87□□□□□ -1.95
CD46-218ENST00000496723 SRD5A3Q9H8P0 318 aa2.87□□□□□ -1.95
CD46-218ENST00000496723 CLEC5AQ9NY25 188 aa2.87□□□□□ -1.95
CD46-218ENST00000496723 SEPT10Q9P0V9 454 aa2.87□□□□□ -1.95
CD46-218ENST00000496723 MRPL11Q9Y3B7 192 aaKnown RBP2.87□□□□□ -1.95
CD46-218ENST00000496723 KLF2Q9Y5W3 355 aaPredicted RBP2.87□□□□□ -1.95
CD46-218ENST00000496723 PRRC2AP48634 2157 aaKnown RBP2.86□□□□□ -1.95
CD46-218ENST00000496723 MAGEB16A2A368 324 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 BCLAF3A2AJT9 711 aaKnown RBP2.86□□□□□ -1.95
CD46-218ENST00000496723 OOEPA6NGQ2 149 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 NEDD8-MDP1E9PL57 170 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 THY1P04216 161 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 KRTAP1-4P0C5Y4 121 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 SUPT20HL2P0C7V6 817 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 ID1P41134 155 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 FHITP49789 147 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 BFSP1Q12934 665 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 NHSL2Q5HYW2 709 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 AGAP6Q5VW22 663 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 BAIAP2L2Q6UXY1 529 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 ZNF730Q6ZMV8 503 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 GALNTL5Q7Z4T8 443 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 AQP12AQ8IXF9 295 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 ZBED8Q8IZ13 594 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 ZNF444Q8N0Y2 327 aaPredicted RBP2.86□□□□□ -1.95
CD46-218ENST00000496723 CD177Q8N6Q3 437 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 ZNF781Q8N8C0 355 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 ATAD1Q8NBU5 361 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 ZNRF1Q8ND25 227 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 KLHL30-AS1Q8NEE0 82 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 ERGIC2Q96RQ1 377 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 ZNF559Q9BR84 538 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 MLPHQ9BV36 600 aaPredicted RBP2.86□□□□□ -1.95
CD46-218ENST00000496723 TUFT1Q9NNX1 390 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 DNAJB9Q9UBS3 223 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 CDH7Q9ULB5 785 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 VSIG4Q9Y279 399 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 FBXO7Q9Y3I1 522 aa2.86□□□□□ -1.95
CD46-218ENST00000496723 GTPBP10A4D1E9 387 aaKnown RBP2.85□□□□□ -1.95
CD46-218ENST00000496723 SDR42E2A6NKP2 422 aa2.85□□□□□ -1.95
CD46-218ENST00000496723 ZNF724A8MTY0 619 aa2.85□□□□□ -1.95
CD46-218ENST00000496723 KLLNB2CW77 178 aa2.85□□□□□ -1.95
CD46-218ENST00000496723 FRAT2O75474 233 aaPredicted RBP2.85□□□□□ -1.95
CD46-218ENST00000496723 ODC1P11926 461 aa2.85□□□□□ -1.95
CD46-218ENST00000496723 ANPEPP15144 967 aa2.85□□□□□ -1.95
CD46-218ENST00000496723 PPP2R1AP30153 589 aa2.85□□□□□ -1.95
CD46-218ENST00000496723 ADARP55265 1226 aaKnown RBP2.85□□□□□ -1.95
CD46-218ENST00000496723 RUNX3Q13761 415 aa2.85□□□□□ -1.95
CD46-218ENST00000496723 ACKR1Q16570 336 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms