RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 SDE2Q6IQ49 451 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 REEP3Q6NUK4 255 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 UBE3DQ7Z6J8 389 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 PLD3Q8IV08 490 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 OR52E1Q8NGJ3 308 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 CREB3L4Q8TEY5 395 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 EXOSC8Q96B26 276 aaKnown RBP12.41□□□□□ -0.42
GARNL3-220ENST00000496711 ZBED6CLQ96FA7 236 aaPredicted RBP12.41□□□□□ -0.42
GARNL3-220ENST00000496711 PDXPQ96GD0 296 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 HRASLS5Q96KN8 279 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 APOOQ9BUR5 198 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 SLC6A17Q9H1V8 727 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 DUSP21Q9H596 190 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 DDX31Q9H8H2 851 aaKnown RBP12.41□□□□□ -0.42
GARNL3-220ENST00000496711 CCNB1IP1Q9NPC3 277 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 A4GALTQ9NPC4 353 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 TEX10Q9NXF1 929 aaPredicted RBP12.41□□□□□ -0.42
GARNL3-220ENST00000496711 C5AR2Q9P296 337 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 WARS2Q9UGM6 360 aaKnown RBP12.41□□□□□ -0.42
GARNL3-220ENST00000496711 MSRAQ9UJ68 235 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 GPSM3Q9Y4H4 160 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 MYO9BQ13459 2157 aa12.41□□□□□ -0.42
GARNL3-220ENST00000496711 A0A0A6YYD5 115 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 PRAMEF33A0A0G2JMD5 474 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 OR52A4PA6NMU1 304 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 ZNF99A8MXY4 864 aaPredicted RBP12.4□□□□□ -0.42
GARNL3-220ENST00000496711 C5orf58C9J3I9 102 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 PRAMEF10O60809 474 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 FAM20BO75063 409 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 SERPIND1P05546 499 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 ANXA8P13928 327 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 GRK3P35626 688 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 KRT20P35900 424 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 SSR2P43308 183 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 MAGEA10P43363 369 aaPredicted RBP12.4□□□□□ -0.42
GARNL3-220ENST00000496711 XCR1P46094 333 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 RPS26P62854 115 aaKnown RBP12.4□□□□□ -0.42
GARNL3-220ENST00000496711 RPP38P78345 283 aaKnown RBP12.4□□□□□ -0.42
GARNL3-220ENST00000496711 EXOC3L2Q2M3D2 409 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 PROX2Q3B8N5 592 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 SPDYE7PQ495Y7 208 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 OR4C11Q6IEV9 310 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 CCDC71Q8IV32 467 aaPredicted RBP12.4□□□□□ -0.42
GARNL3-220ENST00000496711 LGI4Q8N135 537 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 HORMAD2Q8N7B1 307 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 SMYD1Q8NB12 490 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 THAP11Q96EK4 314 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 FEVQ99581 238 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 PIP5K1AQ99755 562 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 OCEL1Q9H607 264 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 GPN2Q9H9Y4 310 aaPredicted RBP12.4□□□□□ -0.42
GARNL3-220ENST00000496711 MRPS30Q9NP92 439 aaKnown RBP12.4□□□□□ -0.42
GARNL3-220ENST00000496711 FZD3Q9NPG1 666 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 SIRT3Q9NTG7 399 aaPredicted RBP12.4□□□□□ -0.42
GARNL3-220ENST00000496711 ERVK-18Q9QC07 812 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 AASSQ9UDR5 926 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 RAB23Q9ULC3 237 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 POFUT2Q9Y2G5 429 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 A8MVJ9 347 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 MRPS14O60783 128 aaKnown RBP12.4□□□□□ -0.42
GARNL3-220ENST00000496711 BCHEP06276 602 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 MAT2AP31153 395 aaKnown RBP12.4□□□□□ -0.42
GARNL3-220ENST00000496711 PXNP49023 591 aaPredicted RBP12.4□□□□□ -0.42
GARNL3-220ENST00000496711 GP2P55259 537 aaKnown RBP12.4□□□□□ -0.42
GARNL3-220ENST00000496711 ABATP80404 500 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 EMX1Q04741 257 aaPredicted RBP12.4□□□□□ -0.42
GARNL3-220ENST00000496711 RAB30Q15771 203 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 MICAQ29983 383 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 C11orf91Q3C1V1 193 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 TMEM35AQ53FP2 167 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 TNFAIP8L2Q6P589 184 aaPredicted RBP12.4□□□□□ -0.42
GARNL3-220ENST00000496711 SLC5A8Q8N695 610 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 FAR1Q8WVX9 515 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 KCNC2Q96PR1 638 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 TEFMQ96QE5 360 aaKnown RBP12.4□□□□□ -0.42
GARNL3-220ENST00000496711 C17orf62Q9BQA9 187 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 FUNDC2Q9BWH2 189 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 SLC28A3Q9HAS3 691 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 PREBQ9HCU5 417 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 SLC6A20Q9NP91 592 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 ACSS1Q9NUB1 689 aaPredicted RBP12.4□□□□□ -0.42
GARNL3-220ENST00000496711 TMEM184CQ9NVA4 438 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 ENPP4Q9Y6X5 453 aa12.4□□□□□ -0.42
GARNL3-220ENST00000496711 TBC1D3DA0A087WVF3 549 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 TBC1D3IA0A087WXS9 549 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 TBC1D3EA0A087X179 549 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 TBC1D3KA0A087X1G2 549 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 A0A0G2JN53 185 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 LRIT2A6NDA9 550 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 TBC1D3FA6NER0 549 aaPredicted RBP12.39□□□□□ -0.43
GARNL3-220ENST00000496711 TBC1D3LB9A6J9 549 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 SH3BP5O60239 455 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 KDM1AO60341 852 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 NDUFS2O75306 463 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 PDE9AO76083 593 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 INMTO95050 263 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 IFNW1P05000 195 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 TBC1D3HP0C7X1 549 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 DRD2P14416 443 aa12.39□□□□□ -0.43
GARNL3-220ENST00000496711 HOXB2P14652 356 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms